Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.65□□□□□ -1.82
HMGXB3Q12766 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.65□□□□□ -1.82
HMGXB3Q12766 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HMGXB3Q12766 RPL21P18-201ENST00000469899 480 ntBASIC3.65□□□□□ -1.83
HMGXB3Q12766 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGXB3Q12766 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGXB3Q12766 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGXB3Q12766 RPAP2P1-201ENST00000603626 1168 ntBASIC3.65□□□□□ -1.83
HMGXB3Q12766 AC091953.2-201ENST00000623979 160 ntBASIC3.65□□□□□ -1.83
HMGXB3Q12766 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGXB3Q12766 OR10AB1P-202ENST00000641219 1686 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGXB3Q12766 SNORA25.6-201ENST00000364121 118 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 GSTA12P-201ENST00000402398 508 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 RPL23AP76-201ENST00000441860 458 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 AC068305.1-201ENST00000497406 726 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 AC108078.2-201ENST00000510750 236 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 AC026412.2-201ENST00000512270 1075 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 RNA5SP182-201ENST00000516064 82 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 AC078814.3-201ENST00000553036 491 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 AL450489.1-201ENST00000612071 468 ntBASIC3.64□□□□□ -1.83
HMGXB3Q12766 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HMGXB3Q12766 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 RNU6-984P-201ENST00000363236 109 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 U8.8-201ENST00000365399 135 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 MIR499A-201ENST00000384903 122 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 AC017007.3-201ENST00000479865 435 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 ELOCP31-201ENST00000540463 467 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 AL137072.1-201ENST00000603444 466 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 AC013562.2-201ENST00000611632 603 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 OR1S1-201ENST00000624470 978 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 AC107021.2-201ENST00000567714 2095 ntBASIC3.63□□□□□ -1.83
HMGXB3Q12766 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
HMGXB3Q12766 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGXB3Q12766 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGXB3Q12766 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGXB3Q12766 MIR9-3-201ENST00000385084 90 ntBASIC3.62□□□□□ -1.83
HMGXB3Q12766 AC245517.4-201ENST00000448601 281 ntBASIC3.62□□□□□ -1.83
HMGXB3Q12766 AC092045.1-201ENST00000495716 1231 ntBASIC3.62□□□□□ -1.83
HMGXB3Q12766 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGXB3Q12766 OR4R2P-201ENST00000530815 597 ntBASIC3.62□□□□□ -1.83
HMGXB3Q12766 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGXB3Q12766 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGXB3Q12766 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGXB3Q12766 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGXB3Q12766 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGXB3Q12766 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 Y_RNA.540-201ENST00000384638 111 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 AC008173.1-201ENST00000418901 264 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 AL162388.1-201ENST00000450912 352 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 RN7SL283P-201ENST00000489055 303 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGXB3Q12766 AC244517.12-201ENST00000623581 663 ntBASIC3.61□□□□□ -1.83
HMGXB3Q12766 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGXB3Q12766 Y_RNA.355-201ENST00000365462 98 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC011753.1-201ENST00000451001 220 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 GSTA11P-201ENST00000452866 669 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC233279.1-201ENST00000455300 423 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 NAMPTP2-201ENST00000505629 1115 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 POU5F1P7-201ENST00000508759 541 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGXB3Q12766 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGXB3Q12766 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGXB3Q12766 Y_RNA.116-201ENST00000363292 103 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGXB3Q12766 AC003989.2-201ENST00000440224 169 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGXB3Q12766 RN7SKP96-201ENST00000516948 297 ntBASIC3.6□□□□□ -1.83
HMGXB3Q12766 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGXB3Q12766 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGXB3Q12766 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HMGXB3Q12766 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGXB3Q12766 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HMGXB3Q12766 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms