Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AL162373.1-201ENST00000620433 407 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AP001784.1-201ENST00000624107 428 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 MTND5P30-201ENST00000452896 1731 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AC009951.1-201ENST00000623674 2614 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH1Q08174 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PCDH1Q08174 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH1Q08174 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PCDH1Q08174 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDH1Q08174 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 RNU6-562P-201ENST00000362731 107 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 RNU6-249P-201ENST00000363016 102 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 Y_RNA.176-201ENST00000363815 109 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 Y_RNA.188-201ENST00000363952 111 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 RNU1-74P-201ENST00000384108 171 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 Y_RNA.463-201ENST00000384271 102 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 RNA5SP284-201ENST00000384547 118 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 RNU6-328P-201ENST00000390887 106 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 SNORA48.4-201ENST00000391089 134 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 GPS2P1-201ENST00000411761 986 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 BX682237.1-201ENST00000415016 335 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 Z93019.1-201ENST00000416450 973 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 AL139095.3-201ENST00000419672 1203 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 CEACAMP1-201ENST00000434624 1035 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH1Q08174 HMGB3P21-201ENST00000452483 547 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 YWHAEP1-201ENST00000453697 763 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH1Q08174 MTND4LP22-201ENST00000508209 276 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 RNU6-685P-201ENST00000517088 95 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AP002404.1-201ENST00000532005 451 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH1Q08174 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 AC008521.1-201ENST00000587471 187 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 BNIP3P16-201ENST00000589779 534 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AC008521.2-201ENST00000591021 259 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH1Q08174 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 FAM157A-202ENST00000615155 405 ntBASIC5.32□□□□□ -1.56
PCDH1Q08174 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH1Q08174 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH1Q08174 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDH1Q08174 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDH1Q08174 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 XIAPP3-201ENST00000312918 795 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 RNU6-1284P-201ENST00000363701 100 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 RNU6-637P-201ENST00000384050 107 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 RNU6-754P-201ENST00000391166 107 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDH1Q08174 PPIAP9-201ENST00000403866 498 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 SDHDP6-201ENST00000414693 480 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 DYNLL1P5-201ENST00000467158 270 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDH1Q08174 HMGB1P30-201ENST00000492455 606 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC015911.1-201ENST00000495111 156 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC104109.1-201ENST00000498563 436 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 RBBP4P6-201ENST00000508098 202 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 MTCO3P44-201ENST00000510977 541 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDH1Q08174 Y_RNA.661-201ENST00000516003 99 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 SCARNA20.4-201ENST00000516969 131 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms