Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU6-289P-201ENST00000364093 107 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 RNU6-777P-201ENST00000364265 104 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 MIR449B-201ENST00000384995 97 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 RNA5SP239-201ENST00000410218 129 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 AC092447.6-201ENST00000414578 210 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MTND4P20-201ENST00000424125 869 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MTND1P20-201ENST00000430341 950 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC091286.1-201ENST00000431233 461 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MTCYBP45-201ENST00000435243 565 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MUPP-201ENST00000438111 566 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 SDCBPP1-201ENST00000440192 890 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC002381.1-201ENST00000447049 280 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 OR6C5P-201ENST00000452388 923 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 HMGB1P15-201ENST00000453854 435 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 snoU109.4-201ENST00000458953 143 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.83
CDK3Q00526 COX7A2P2-201ENST00000505291 250 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 SLC25A15P5-201ENST00000508033 253 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 LTV1P1-201ENST00000510683 1237 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC104619.4-201ENST00000510773 249 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 RNU6-678P-201ENST00000516832 109 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK3Q00526 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK3Q00526 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK3Q00526 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK3Q00526 AC008011.1-201ENST00000545989 227 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 OR6C7P-201ENST00000547875 934 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.65□□□□□ -1.83
CDK3Q00526 AC055876.5-201ENST00000605667 259 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC011816.2-201ENST00000607089 556 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 VIS1.1-201ENST00000610517 203 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK3Q00526 AL031667.3-201ENST00000620124 655 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AL445264.1-201ENST00000621719 171 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.65□□□□□ -1.83
CDK3Q00526 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 AC119674.1-207ENST00000641355 633 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 MAPK10-253ENST00000641010 4072 ntBASIC3.65□□□□□ -1.83
CDK3Q00526 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDK3Q00526 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDK3Q00526 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CDK3Q00526 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK3Q00526 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 RNU6-335P-201ENST00000364563 113 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 RNU6-343P-201ENST00000364709 104 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 RNA5SP88-201ENST00000365560 109 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK3Q00526 RNU6-723P-201ENST00000383973 107 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 RNA5SP171-201ENST00000391071 115 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK3Q00526 RNU4-72P-201ENST00000410754 173 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC245052.5-201ENST00000416320 649 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC069157.1-201ENST00000421749 137 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK3Q00526 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK3Q00526 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.64□□□□□ -1.83
CDK3Q00526 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC072039.1-201ENST00000477611 581 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK3Q00526 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.64□□□□□ -1.83
CDK3Q00526 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.64□□□□□ -1.83
CDK3Q00526 COX6CP8-201ENST00000522620 226 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AP004371.1-201ENST00000525240 214 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC107016.1-201ENST00000550463 337 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC090616.2-202ENST00000584248 222 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC010928.3-201ENST00000587712 541 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC128687.1-201ENST00000605304 619 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AL359715.5-201ENST00000623431 443 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC091905.1-201ENST00000624400 311 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.64□□□□□ -1.83
CDK3Q00526 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDK3Q00526 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 AC011477.1-204ENST00000623416 1325 ntBASIC3.64□□□□□ -1.83
CDK3Q00526 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDK3Q00526 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms