Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC025260.1-201ENST00000548858 430 ntBASIC1.58□□□□□ -2.16
PRKDCP78527 MIR5007-201ENST00000583098 95 ntBASIC1.58□□□□□ -2.16
PRKDCP78527 AC126118.1-201ENST00000607744 628 ntBASIC1.58□□□□□ -2.16
PRKDCP78527 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PRKDCP78527 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PRKDCP78527 AC090229.1-201ENST00000590983 1609 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 API5P2-201ENST00000397055 1498 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.57□□□□□ -2.16
PRKDCP78527 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 LINC00888-204ENST00000487386 421 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AC034244.1-201ENST00000507687 207 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.57□□□□□ -2.16
PRKDCP78527 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKDCP78527 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
PRKDCP78527 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.57□□□□□ -2.16
PRKDCP78527 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKDCP78527 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PRKDCP78527 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKDCP78527 AL512633.1-201ENST00000399931 655 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AL159169.1-201ENST00000421119 127 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AL034379.1-201ENST00000423216 253 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 AP001207.1-201ENST00000524051 481 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 AC108479.2-201ENST00000617314 601 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AC022336.2-201ENST00000568966 2538 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKDCP78527 AC007342.7-201ENST00000624610 2337 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKDCP78527 AC092798.1-201ENST00000458542 409 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 SUMO2P4-201ENST00000504193 276 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 RN7SKP49-201ENST00000516675 260 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.57□□□□□ -2.16
PRKDCP78527 OR4P1P-201ENST00000530808 1136 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKDCP78527 AC105137.2-201ENST00000569073 466 ntBASIC1.57□□□□□ -2.16
PRKDCP78527 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.57□□□□□ -2.16
PRKDCP78527 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
PRKDCP78527 AC012498.1-201ENST00000424037 437 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.56□□□□□ -2.16
PRKDCP78527 RPS15AP17-201ENST00000470598 390 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AC004263.1-201ENST00000479327 332 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.56□□□□□ -2.16
PRKDCP78527 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.56□□□□□ -2.16
PRKDCP78527 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.56□□□□□ -2.16
PRKDCP78527 AL008729.2-201ENST00000606393 473 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AC084035.1-201ENST00000634543 607 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 KPNA2P1-201ENST00000458289 1591 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 RNU1-57P-201ENST00000384491 166 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 SNORA40.18-201ENST00000391200 128 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 SNORA11.4-201ENST00000408823 129 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.56□□□□□ -2.16
PRKDCP78527 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.56□□□□□ -2.16
PRKDCP78527 OR4A45P-201ENST00000529954 901 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 DNAJC19P9-201ENST00000555084 351 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.56□□□□□ -2.16
PRKDCP78527 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.56□□□□□ -2.16
PRKDCP78527 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.56□□□□□ -2.16
PRKDCP78527 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AL359198.2-201ENST00000611836 194 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PRKDCP78527 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
PRKDCP78527 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AL353597.2-202ENST00000434901 373 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AL118520.1-201ENST00000450770 291 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.56□□□□□ -2.16
PRKDCP78527 AC092851.1-201ENST00000535964 478 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AL731537.2-201ENST00000561565 951 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 MIR5092-201ENST00000583139 88 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 APOOP1-201ENST00000604695 592 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 AC007620.3-201ENST00000608131 497 ntBASIC1.56□□□□□ -2.16
PRKDCP78527 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PRKDCP78527 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.55□□□□□ -2.16
PRKDCP78527 AC104332.2-201ENST00000429959 156 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AL589765.3-201ENST00000446084 462 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AC233279.1-201ENST00000455300 423 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 OR7K1P-201ENST00000546439 926 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 MTCO2P17-201ENST00000424336 677 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 XKRY-201ENST00000510392 1100 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.55□□□□□ -2.16
PRKDCP78527 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.55□□□□□ -2.16
PRKDCP78527 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.55□□□□□ -2.16
PRKDCP78527 RPAP2P1-201ENST00000603626 1168 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.55□□□□□ -2.16
PRKDCP78527 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms