Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
YBX1P67809 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 UBBP2-201ENST00000376781 231 ntBASIC4.89□□□□□ -1.63
YBX1P67809 Y_RNA.414-201ENST00000384011 101 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RNU6-1207P-201ENST00000384343 107 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RNU6-39P-201ENST00000384344 107 ntBASIC4.89□□□□□ -1.63
YBX1P67809 DSTNP4-201ENST00000399472 474 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AL592114.1-201ENST00000403842 483 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC074085.1-201ENST00000413598 418 ntBASIC4.89□□□□□ -1.63
YBX1P67809 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.89□□□□□ -1.63
YBX1P67809 GJA6P-201ENST00000415117 1042 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC009965.2-201ENST00000425328 970 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
YBX1P67809 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 HMGB3P11-201ENST00000440127 604 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC093156.1-201ENST00000440382 670 ntBASIC4.89□□□□□ -1.63
YBX1P67809 CEACAMP9-201ENST00000442990 513 ntBASIC4.89□□□□□ -1.63
YBX1P67809 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.89□□□□□ -1.63
YBX1P67809 AL356981.1-201ENST00000454879 684 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC005229.2-201ENST00000456995 399 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RNU6-1208P-201ENST00000459588 107 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RN7SL443P-201ENST00000464331 290 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RPL7AP6-201ENST00000477943 801 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RN7SL97P-201ENST00000486780 299 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RNU6-864P-201ENST00000516256 108 ntBASIC4.89□□□□□ -1.63
YBX1P67809 RN7SKP219-201ENST00000516825 296 ntBASIC4.89□□□□□ -1.63
YBX1P67809 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC092490.3-201ENST00000545370 572 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AL117187.1-201ENST00000555482 181 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC006349.1-201ENST00000555526 235 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.89□□□□□ -1.63
YBX1P67809 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.89□□□□□ -1.63
YBX1P67809 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.89□□□□□ -1.63
YBX1P67809 AC009852.2-201ENST00000567898 485 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 AC011447.4-201ENST00000587562 111 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.89□□□□□ -1.63
YBX1P67809 AC093799.2-201ENST00000610062 578 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC116447.1-201ENST00000613153 453 ntBASIC4.89□□□□□ -1.63
YBX1P67809 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 AC090510.2-201ENST00000617465 629 ntBASIC4.89□□□□□ -1.63
YBX1P67809 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 AP001784.1-201ENST00000624107 428 ntBASIC4.89□□□□□ -1.63
YBX1P67809 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
YBX1P67809 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
YBX1P67809 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.89□□□□□ -1.63
YBX1P67809 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
YBX1P67809 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
YBX1P67809 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
YBX1P67809 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 RNU6-522P-201ENST00000364497 107 ntBASIC4.88□□□□□ -1.63
YBX1P67809 Y_RNA.530-201ENST00000384587 101 ntBASIC4.88□□□□□ -1.63
YBX1P67809 MIR454-201ENST00000390180 115 ntBASIC4.88□□□□□ -1.63
YBX1P67809 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
YBX1P67809 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.88□□□□□ -1.63
YBX1P67809 SNORA11-201ENST00000408789 128 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RPL37P10-201ENST00000412884 288 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.88□□□□□ -1.63
YBX1P67809 AC093162.1-201ENST00000419682 124 ntBASIC4.88□□□□□ -1.63
YBX1P67809 CHIAP3-201ENST00000423668 1133 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 OR2AH1P-201ENST00000425717 928 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AL590762.4-201ENST00000425885 253 ntBASIC4.88□□□□□ -1.63
YBX1P67809 USP9YP16-201ENST00000430287 407 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RPL36P19-201ENST00000430744 301 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.88□□□□□ -1.63
YBX1P67809 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
YBX1P67809 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 MRPS31P2-201ENST00000451581 518 ntBASIC4.88□□□□□ -1.63
YBX1P67809 HMGB3P22-202ENST00000451823 572 ntBASIC4.88□□□□□ -1.63
YBX1P67809 NANOGP10-201ENST00000453325 895 ntBASIC4.88□□□□□ -1.63
YBX1P67809 USP9YP23-201ENST00000455085 407 ntBASIC4.88□□□□□ -1.63
YBX1P67809 BTF3P15-201ENST00000455606 336 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RPL35AP28-201ENST00000459730 331 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AL049714.1-201ENST00000466686 347 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RPL7L1P8-201ENST00000469911 741 ntBASIC4.88□□□□□ -1.63
YBX1P67809 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 MRPS33P2-201ENST00000507850 322 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RNU6-123P-201ENST00000516163 102 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RNA5SP43-201ENST00000516559 110 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RNU6-1137P-201ENST00000517073 99 ntBASIC4.88□□□□□ -1.63
YBX1P67809 RN7SKP147-201ENST00000517154 244 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 AP000676.2-201ENST00000529711 301 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AC103843.2-201ENST00000530523 682 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms