Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.36□□□□□ -2.19
RPL39P62891 AL359535.1-201ENST00000612100 1087 ntBASIC1.36□□□□□ -2.19
RPL39P62891 AC104307.1-201ENST00000616142 196 ntBASIC1.36□□□□□ -2.19
RPL39P62891 AL356266.1-201ENST00000623311 483 ntBASIC1.36□□□□□ -2.19
RPL39P62891 AP000676.4-201ENST00000624659 623 ntBASIC1.36□□□□□ -2.19
RPL39P62891 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPL39P62891 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
RPL39P62891 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL39P62891 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
RPL39P62891 RNU6-146P-201ENST00000384602 108 ntBASIC1.35□□□□□ -2.19
RPL39P62891 MIR491-201ENST00000384877 84 ntBASIC1.35□□□□□ -2.19
RPL39P62891 RNU1-101P-201ENST00000391171 127 ntBASIC1.35□□□□□ -2.19
RPL39P62891 AL023284.1-201ENST00000403956 276 ntBASIC1.35□□□□□ -2.19
RPL39P62891 RNU2-40P-201ENST00000410833 196 ntBASIC1.35□□□□□ -2.19
RPL39P62891 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.35□□□□□ -2.19
RPL39P62891 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.35□□□□□ -2.19
RPL39P62891 PGBD4P3-201ENST00000440731 581 ntBASIC1.35□□□□□ -2.19
RPL39P62891 MTCO3P11-201ENST00000455103 774 ntBASIC1.35□□□□□ -2.19
RPL39P62891 RPS23P3-201ENST00000470993 430 ntBASIC1.35□□□□□ -2.19
RPL39P62891 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL39P62891 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL39P62891 RPL7L1P13-201ENST00000511702 739 ntBASIC1.35□□□□□ -2.19
RPL39P62891 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.35□□□□□ -2.19
RPL39P62891 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL39P62891 VN1R78P-201ENST00000597393 564 ntBASIC1.35□□□□□ -2.19
RPL39P62891 AC026790.2-201ENST00000606282 430 ntBASIC1.35□□□□□ -2.19
RPL39P62891 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.35□□□□□ -2.19
RPL39P62891 AC140725.3-201ENST00000616193 880 ntBASIC1.35□□□□□ -2.19
RPL39P62891 AL158801.5-201ENST00000623123 465 ntBASIC1.35□□□□□ -2.19
RPL39P62891 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL39P62891 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL39P62891 MTND5P23-201ENST00000430812 1655 ntBASIC1.35□□□□□ -2.19
RPL39P62891 PABPC1P7-201ENST00000413177 1513 ntBASIC1.35□□□□□ -2.19
RPL39P62891 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL39P62891 AL359693.1-201ENST00000614959 2407 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AL024474.1-201ENST00000404655 591 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AL513331.1-201ENST00000411908 397 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.34□□□□□ -2.19
RPL39P62891 AC048351.1-201ENST00000420064 602 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AL451062.2-201ENST00000427515 271 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL39P62891 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.34□□□□□ -2.19
RPL39P62891 RPL5P23-201ENST00000496040 868 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL39P62891 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL39P62891 VN1R84P-201ENST00000593697 235 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AC245517.5-201ENST00000611529 162 ntBASIC1.34□□□□□ -2.19
RPL39P62891 AL162233.1-201ENST00000620014 944 ntBASIC1.34□□□□□ -2.19
RPL39P62891 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL39P62891 AC243829.7-201ENST00000633081 225 ntBASIC1.34□□□□□ -2.19
RPL39P62891 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
RPL39P62891 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
RPL39P62891 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 CENPCP1-201ENST00000533085 2578 ntBASIC1.33□□□□□ -2.2
RPL39P62891 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPL39P62891 RNU1-73P-201ENST00000383971 164 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AL030996.1-201ENST00000411430 235 ntBASIC1.33□□□□□ -2.2
RPL39P62891 RNF19BPX-201ENST00000426224 625 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL39P62891 RPL23AP58-201ENST00000440453 469 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL39P62891 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL39P62891 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL39P62891 HMGN1P5-201ENST00000448591 263 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC004924.1-201ENST00000480160 781 ntBASIC1.33□□□□□ -2.2
RPL39P62891 RPS29P20-201ENST00000489592 171 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 AC104090.1-201ENST00000506341 1171 ntBASIC1.33□□□□□ -2.2
RPL39P62891 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL39P62891 HMGB3P3-201ENST00000510526 400 ntBASIC1.33□□□□□ -2.2
RPL39P62891 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 AP003122.3-201ENST00000526316 255 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AP001317.1-201ENST00000531194 960 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC026464.5-201ENST00000562497 722 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 AC019159.1-201ENST00000605094 187 ntBASIC1.33□□□□□ -2.2
RPL39P62891 KATNBL1P1-201ENST00000605192 748 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC002064.3-201ENST00000623448 346 ntBASIC1.33□□□□□ -2.2
RPL39P62891 AC079597.1-201ENST00000624306 508 ntBASIC1.33□□□□□ -2.2
RPL39P62891 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPL39P62891 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPL39P62891 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.33□□□□□ -2.2
RPL39P62891 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
RPL39P62891 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RPL39P62891 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RPL39P62891 SNORA16.1-201ENST00000364597 132 ntBASIC1.32□□□□□ -2.2
RPL39P62891 RN7SKP32-201ENST00000410167 303 ntBASIC1.32□□□□□ -2.2
RPL39P62891 RNU4-53P-201ENST00000410828 140 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC096664.2-201ENST00000411843 406 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC007064.1-201ENST00000412238 351 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.32□□□□□ -2.2
RPL39P62891 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.32□□□□□ -2.2
RPL39P62891 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.32□□□□□ -2.2
RPL39P62891 AL831737.1-201ENST00000441288 271 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms