Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.41□□□□□ -2.02
AP3S2P59780 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.41□□□□□ -2.02
AP3S2P59780 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
AP3S2P59780 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
AP3S2P59780 AC092593.1-201ENST00000515413 1815 ntBASIC2.4□□□□□ -2.02
AP3S2P59780 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.4□□□□□ -2.02
AP3S2P59780 AL161912.2-201ENST00000565707 3007 ntBASIC2.4□□□□□ -2.02
AP3S2P59780 RNU6-193P-201ENST00000410977 107 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 AC080125.1-201ENST00000414888 684 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.4□□□□□ -2.03
AP3S2P59780 SRIP1-201ENST00000489235 288 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC090543.1-201ENST00000492168 485 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.4□□□□□ -2.03
AP3S2P59780 RNA5SP471-201ENST00000516971 106 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 SNORA31.21-201ENST00000517180 77 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 RNU6-889P-201ENST00000517189 103 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.4□□□□□ -2.03
AP3S2P59780 AC090136.1-201ENST00000520009 240 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.4□□□□□ -2.03
AP3S2P59780 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
AP3S2P59780 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 UBL5P2-201ENST00000583788 219 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC012254.4-201ENST00000588843 273 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AC015871.2-201ENST00000603605 948 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 DUXAP3-201ENST00000603616 594 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 MIR6820-201ENST00000611508 62 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 AL161629.2-201ENST00000615347 275 ntBASIC2.4□□□□□ -2.03
AP3S2P59780 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.4□□□□□ -2.03
AP3S2P59780 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
AP3S2P59780 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 AL049781.1-201ENST00000623195 3585 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 AL359693.1-201ENST00000614959 2407 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
AP3S2P59780 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 RNU6-173P-201ENST00000364215 104 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
AP3S2P59780 RNU6-441P-201ENST00000384545 106 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 MIR323B-201ENST00000385269 82 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
AP3S2P59780 U3.29-201ENST00000391296 212 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 RPS4XP7-201ENST00000406274 780 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.39□□□□□ -2.03
AP3S2P59780 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 NDUFB4P6-201ENST00000436819 366 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.39□□□□□ -2.03
AP3S2P59780 AL671855.1-201ENST00000446875 1203 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC091959.2-201ENST00000477363 321 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC117522.3-201ENST00000507974 584 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.39□□□□□ -2.03
AP3S2P59780 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 PAICSP4-201ENST00000517543 1253 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.39□□□□□ -2.03
AP3S2P59780 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
AP3S2P59780 AC024153.1-201ENST00000603103 365 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC008277.2-201ENST00000605196 797 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AL023583.1-201ENST00000607518 1143 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AL162274.2-201ENST00000614406 332 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 STMN1P1-201ENST00000617809 440 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
AP3S2P59780 MIR6730-201ENST00000622213 67 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 AC092608.3-201ENST00000625017 386 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 CYP3A51P-201ENST00000633513 256 ntBASIC2.39□□□□□ -2.03
AP3S2P59780 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AP3S2P59780 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.38□□□□□ -2.03
AP3S2P59780 RNU6-730P-201ENST00000383954 104 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP3S2P59780 AC092745.2-202ENST00000411880 369 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 SYF2P2-201ENST00000417620 583 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 MTCO1P39-201ENST00000426148 480 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.38□□□□□ -2.03
AP3S2P59780 AL035246.1-201ENST00000433554 1255 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms