Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 U3.11-201ENST00000364476 212 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 Y_RNA.255-201ENST00000364581 97 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 RNU6-996P-201ENST00000365438 107 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 Y_RNA.367-201ENST00000365544 101 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 RNU6-1011P-201ENST00000384668 107 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 RNU6-606P-201ENST00000384721 111 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 RNU6-278P-201ENST00000390945 109 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 BX510359.3-201ENST00000422168 306 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC093414.1-201ENST00000434712 514 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 MRPL48P1-201ENST00000445390 636 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 CBWD4P-201ENST00000445695 655 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 DDX3P2-201ENST00000446138 111 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 MTND1P9-201ENST00000453775 944 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 RPL23AP56-201ENST00000460778 453 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 RN7SL177P-201ENST00000476596 299 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC020890.1-201ENST00000491837 504 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 TMEM248P1-201ENST00000510579 951 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 RNU6-513P-201ENST00000516104 104 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 SNORD60.2-201ENST00000516883 86 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC011979.2-201ENST00000527568 352 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.29□□□□□ -1.72
CLRN1P58418 AP000857.1-201ENST00000532151 543 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AL133271.1-201ENST00000538229 291 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.29□□□□□ -1.72
CLRN1P58418 GSTP1P1-201ENST00000548078 319 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 SETP7-201ENST00000552169 453 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 RPS3AP23-202ENST00000574601 686 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC020910.3-201ENST00000603701 874 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC010680.3-201ENST00000604215 520 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AL121992.2-201ENST00000606262 256 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 AC009233.1-201ENST00000616477 371 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 AC007742.2-201ENST00000618226 398 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 CR381572.2-201ENST00000624852 397 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CLRN1P58418 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 AC027290.2-201ENST00000623210 18662 ntBASIC4.29□□□□□ -1.72
CLRN1P58418 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
CLRN1P58418 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLRN1P58418 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLRN1P58418 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLRN1P58418 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.28□□□□□ -1.72
CLRN1P58418 LINC01355-201ENST00000566551 5444 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 RIOK3P1-201ENST00000418778 1528 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 RNA5SP123-201ENST00000363244 119 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC019155.1-201ENST00000382242 574 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 Y_RNA.493-201ENST00000384422 102 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC005522.1-201ENST00000395416 346 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AL136116.1-201ENST00000403591 381 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 U3.35-201ENST00000408405 208 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 RNU2-47P-201ENST00000410649 186 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC114755.2-201ENST00000413520 361 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.28□□□□□ -1.72
CLRN1P58418 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN1P58418 AL031584.1-201ENST00000447169 754 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC006480.1-201ENST00000449887 378 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 CYCSP34-201ENST00000458172 304 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 RNU7-59P-201ENST00000459101 61 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.28□□□□□ -1.72
CLRN1P58418 AC068305.1-201ENST00000497406 726 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 EIF4EP3-201ENST00000498782 656 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN1P58418 RN7SKP46-201ENST00000515942 234 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 SNORD116-26-201ENST00000516006 96 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 SUB1P1-201ENST00000524415 382 ntBASIC4.28□□□□□ -1.72
CLRN1P58418 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms