Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.51□□□□□ -1.85
PEX3P56589 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.51□□□□□ -1.85
PEX3P56589 AC107075.1-201ENST00000613695 314 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC006386.1-201ENST00000619436 415 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC073348.1-201ENST00000623002 331 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC068787.1-201ENST00000623908 691 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AL512506.2-201ENST00000624472 458 ntBASIC3.51□□□□□ -1.85
PEX3P56589 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 ELL2P4-201ENST00000446870 1376 ntBASIC3.51□□□□□ -1.85
PEX3P56589 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.5□□□□□ -1.85
PEX3P56589 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
PEX3P56589 MIR513B-201ENST00000385136 84 ntBASIC3.5□□□□□ -1.85
PEX3P56589 RNU6-1300P-201ENST00000391046 108 ntBASIC3.5□□□□□ -1.85
PEX3P56589 TMSB4XP8-201ENST00000402089 135 ntBASIC3.5□□□□□ -1.85
PEX3P56589 RPL31P2-201ENST00000413849 377 ntBASIC3.5□□□□□ -1.85
PEX3P56589 TMSB4XP6-201ENST00000415187 135 ntBASIC3.5□□□□□ -1.85
PEX3P56589 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 RPS12P23-201ENST00000419579 400 ntBASIC3.5□□□□□ -1.85
PEX3P56589 TMSB4XP1-201ENST00000424567 135 ntBASIC3.5□□□□□ -1.85
PEX3P56589 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.5□□□□□ -1.85
PEX3P56589 AC241584.1-201ENST00000438469 1241 ntBASIC3.5□□□□□ -1.85
PEX3P56589 ISCA1P2-201ENST00000438679 421 ntBASIC3.5□□□□□ -1.85
PEX3P56589 USP9YP22-201ENST00000438971 294 ntBASIC3.5□□□□□ -1.85
PEX3P56589 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.5□□□□□ -1.85
PEX3P56589 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.5□□□□□ -1.85
PEX3P56589 RNU6-311P-201ENST00000516224 102 ntBASIC3.5□□□□□ -1.85
PEX3P56589 RN7SKP277-201ENST00000516895 283 ntBASIC3.5□□□□□ -1.85
PEX3P56589 SNORA48.10-201ENST00000516965 160 ntBASIC3.5□□□□□ -1.85
PEX3P56589 SCARNA20.6-201ENST00000517251 106 ntBASIC3.5□□□□□ -1.85
PEX3P56589 AC087808.1-201ENST00000520501 361 ntBASIC3.5□□□□□ -1.85
PEX3P56589 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
PEX3P56589 MTCO2P15-201ENST00000532655 656 ntBASIC3.5□□□□□ -1.85
PEX3P56589 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
PEX3P56589 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.5□□□□□ -1.85
PEX3P56589 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.5□□□□□ -1.85
PEX3P56589 AC093519.1-201ENST00000566109 298 ntBASIC3.5□□□□□ -1.85
PEX3P56589 MIR5004-201ENST00000579078 107 ntBASIC3.5□□□□□ -1.85
PEX3P56589 SNORD39.3-201ENST00000584451 71 ntBASIC3.5□□□□□ -1.85
PEX3P56589 AC008507.1-201ENST00000587506 734 ntBASIC3.5□□□□□ -1.85
PEX3P56589 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.5□□□□□ -1.85
PEX3P56589 AC091946.2-201ENST00000606105 291 ntBASIC3.5□□□□□ -1.85
PEX3P56589 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 AC138932.5-201ENST00000617759 563 ntBASIC3.5□□□□□ -1.85
PEX3P56589 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
PEX3P56589 MKKS-204ENST00000639674 192 ntBASIC3.5□□□□□ -1.85
PEX3P56589 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 AC092326.2-201ENST00000624772 1561 ntBASIC3.5□□□□□ -1.85
PEX3P56589 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PEX3P56589 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.49□□□□□ -1.85
PEX3P56589 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 AC109315.1-201ENST00000584143 1347 ntBASIC3.49□□□□□ -1.85
PEX3P56589 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.49□□□□□ -1.85
PEX3P56589 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PEX3P56589 OR1S2-201ENST00000302592 978 ntBASIC3.49□□□□□ -1.85
PEX3P56589 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PEX3P56589 RNU6-413P-201ENST00000384115 107 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RNU6-636P-201ENST00000384598 107 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AL161449.1-201ENST00000414531 1199 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RPS15AP40-201ENST00000419621 391 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.49□□□□□ -1.85
PEX3P56589 AC008065.1-201ENST00000428525 348 ntBASIC3.49□□□□□ -1.85
PEX3P56589 SEPT7P5-201ENST00000434048 306 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
PEX3P56589 AC092393.1-201ENST00000439625 742 ntBASIC3.49□□□□□ -1.85
PEX3P56589 CR769776.1-201ENST00000441254 787 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RPL23AP76-201ENST00000441860 458 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.49□□□□□ -1.85
PEX3P56589 ELOCP23-201ENST00000452014 332 ntBASIC3.49□□□□□ -1.85
PEX3P56589 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 PNPLA4P1-201ENST00000458328 305 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RPL5P24-201ENST00000463742 885 ntBASIC3.49□□□□□ -1.85
PEX3P56589 SNRPGP3-201ENST00000469405 227 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 AC108078.3-201ENST00000502633 489 ntBASIC3.49□□□□□ -1.85
PEX3P56589 SNX5P1-201ENST00000505757 1041 ntBASIC3.49□□□□□ -1.85
PEX3P56589 MTCYBP37-201ENST00000510642 1133 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.49□□□□□ -1.85
PEX3P56589 AC008837.2-201ENST00000513076 418 ntBASIC3.49□□□□□ -1.85
PEX3P56589 RN7SKP234-201ENST00000517173 224 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms