Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TAF9P1-201ENST00000445421 515 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AL162151.2-201ENST00000448875 158 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RPS17P13-201ENST00000448974 407 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 TAF9P2-201ENST00000454958 515 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RPL23AP62-201ENST00000463396 453 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RPL9P32-201ENST00000464118 620 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RN7SL330P-201ENST00000469709 307 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC069499.1-201ENST00000489433 509 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC110792.1-201ENST00000491826 472 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC078817.1-201ENST00000492623 435 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC082651.2-201ENST00000496833 166 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC080014.1-201ENST00000496877 1201 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC093767.1-201ENST00000504523 156 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDAC4P56524 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 RNA5SP216-201ENST00000516111 123 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC104986.1-201ENST00000517978 436 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
HDAC4P56524 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.09□□□□□ -1.75
HDAC4P56524 AP003385.6-201ENST00000531603 374 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 OR8R1P-201ENST00000543943 764 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC090116.1-201ENST00000615679 446 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 MIR6075-201ENST00000620782 95 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC073530.2-201ENST00000623987 261 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC079228.1-201ENST00000624774 1049 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 CYP3A51P-201ENST00000633513 256 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AC099063.3-201ENST00000642066 185 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AP002907.1-201ENST00000606361 1430 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 OR4G11P-202ENST00000642116 1414 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDAC4P56524 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDAC4P56524 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDAC4P56524 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 RNU6-525P-201ENST00000363685 104 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 RNU6-660P-201ENST00000364566 109 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 SNORA70.4-201ENST00000365509 134 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 RNA5SP283-201ENST00000365604 119 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.08□□□□□ -1.76
HDAC4P56524 RN7SKP202-201ENST00000410439 330 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 RPS15AP38-201ENST00000413110 372 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 MTCO1P23-201ENST00000415223 1526 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 BX119904.4-201ENST00000424402 301 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 ZNF833P-201ENST00000424938 1494 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC087650.1-201ENST00000431445 468 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AL590103.1-201ENST00000434488 307 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 HSFY6P-201ENST00000445573 403 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.08□□□□□ -1.76
HDAC4P56524 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 TPTE2P5-203ENST00000458118 728 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 PLGLA-201ENST00000465668 449 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 PABPC1P3-201ENST00000469174 459 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 TMED11P-201ENST00000479478 690 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 AL024509.2-201ENST00000493462 493 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC026726.1-201ENST00000512859 601 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 SNORA67.7-201ENST00000516664 135 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 AP002001.2-201ENST00000529025 1469 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AP000889.1-201ENST00000530968 660 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC007954.1-201ENST00000554198 494 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.08□□□□□ -1.76
HDAC4P56524 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.08□□□□□ -1.76
HDAC4P56524 AC012435.1-202ENST00000568772 240 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 ROCK1P1-201ENST00000573767 549 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 MIR5186-201ENST00000577504 120 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 MIR5047-201ENST00000579212 100 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 MIR3158-1-201ENST00000583596 81 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 MAGOH2P-202ENST00000584384 429 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.08□□□□□ -1.76
HDAC4P56524 Z69908.1-201ENST00000622603 247 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms