Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.72□□□□□ -1.65
GFRA1P56159 MIR3691-201ENST00000578066 90 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.72□□□□□ -1.65
GFRA1P56159 AC006116.3-201ENST00000592968 361 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AL592436.1-201ENST00000605135 558 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AL133255.1-201ENST00000606374 441 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC099669.2-201ENST00000616549 437 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 AL357559.1-201ENST00000622228 274 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 MIR4275-201ENST00000636486 87 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC135068.12-201ENST00000637370 931 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GFRA1P56159 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.72□□□□□ -1.65
GFRA1P56159 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GFRA1P56159 AL022311.1-201ENST00000623726 19416 ntBASIC4.72□□□□□ -1.65
GFRA1P56159 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.72□□□□□ -1.65
GFRA1P56159 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.72□□□□□ -1.65
GFRA1P56159 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
GFRA1P56159 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
GFRA1P56159 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
GFRA1P56159 ABCC13-202ENST00000463099 3842 ntBASIC4.71□□□□□ -1.65
GFRA1P56159 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.71□□□□□ -1.66
GFRA1P56159 RNA5SP90-201ENST00000364801 99 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 SNORA5.1-201ENST00000384275 131 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 MIR600-201ENST00000385007 98 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 UBE2V1P2-201ENST00000397758 440 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 RN7SKP213-201ENST00000410746 298 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 RPL7L1P10-201ENST00000427790 463 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 RPL7AP49-201ENST00000429522 581 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AL591438.1-201ENST00000433508 581 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.71□□□□□ -1.66
GFRA1P56159 RPL12P18-201ENST00000437175 325 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC004866.2-201ENST00000438285 481 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 PTMAP6-201ENST00000439110 327 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 MED28P3-201ENST00000444288 531 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 PRPS1P1-201ENST00000445305 876 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC012512.1-201ENST00000446594 718 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC004801.2-202ENST00000463559 283 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC117522.3-201ENST00000507974 584 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 RNU6-390P-201ENST00000516259 103 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 RNU6-1038P-201ENST00000516516 104 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 MYL12AP1-201ENST00000518490 515 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC126177.3-201ENST00000551839 688 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AL118558.2-201ENST00000556294 238 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC114947.2-201ENST00000565748 2125 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 Y_RNA.812-201ENST00000610788 101 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 Y_RNA.784-201ENST00000613803 101 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 Y_RNA.787-201ENST00000616522 101 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 Y_RNA.780-201ENST00000617336 101 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 Y_RNA.801-201ENST00000619005 101 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.71□□□□□ -1.66
GFRA1P56159 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.71□□□□□ -1.66
GFRA1P56159 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 AC103710.2-202ENST00000641454 2853 ntBASIC4.71□□□□□ -1.66
GFRA1P56159 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GFRA1P56159 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
GFRA1P56159 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.7□□□□□ -1.66
GFRA1P56159 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.7□□□□□ -1.66
GFRA1P56159 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GFRA1P56159 RN7SKP224-201ENST00000364140 325 ntBASIC4.7□□□□□ -1.66
GFRA1P56159 Y_RNA.378-201ENST00000365652 113 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms