Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-560P-201ENST00000364007 108 ntBASIC3.08□□□□□ -1.92
LIM2P55344 SNORA51.2-201ENST00000364595 132 ntBASIC3.08□□□□□ -1.92
LIM2P55344 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
LIM2P55344 RNA5SP229-201ENST00000410809 99 ntBASIC3.08□□□□□ -1.92
LIM2P55344 MTCO2P8-201ENST00000412213 658 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC063979.1-201ENST00000415539 377 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 AL035410.1-201ENST00000427409 427 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC005326.1-201ENST00000429197 123 ntBASIC3.08□□□□□ -1.92
LIM2P55344 RPL23AP74-201ENST00000437246 471 ntBASIC3.08□□□□□ -1.92
LIM2P55344 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 AC127537.2-201ENST00000439258 465 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC004854.1-201ENST00000440356 349 ntBASIC3.08□□□□□ -1.92
LIM2P55344 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 EXOSC3P1-201ENST00000448649 500 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC125238.1-201ENST00000448842 249 ntBASIC3.08□□□□□ -1.92
LIM2P55344 ZNF886P-201ENST00000450781 723 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 AC011979.1-201ENST00000472300 483 ntBASIC3.08□□□□□ -1.92
LIM2P55344 NCOR1P1-202ENST00000486162 291 ntBASIC3.08□□□□□ -1.92
LIM2P55344 TRAV31-201ENST00000502780 342 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC021146.5-201ENST00000503544 545 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 AC074250.1-201ENST00000511117 192 ntBASIC3.08□□□□□ -1.92
LIM2P55344 RN7SKP31-201ENST00000516354 278 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
LIM2P55344 AP004371.1-201ENST00000525240 214 ntBASIC3.08□□□□□ -1.92
LIM2P55344 OR5D17P-201ENST00000531492 978 ntBASIC3.08□□□□□ -1.92
LIM2P55344 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LIM2P55344 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.08□□□□□ -1.92
LIM2P55344 AC005832.3-201ENST00000537929 631 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.08□□□□□ -1.92
LIM2P55344 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
LIM2P55344 MTND1P8-201ENST00000571424 950 ntBASIC3.08□□□□□ -1.92
LIM2P55344 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.08□□□□□ -1.92
LIM2P55344 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 BNIP3P26-201ENST00000600827 554 ntBASIC3.08□□□□□ -1.92
LIM2P55344 CKS1BP3-201ENST00000600888 237 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC024220.1-201ENST00000603675 484 ntBASIC3.08□□□□□ -1.92
LIM2P55344 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 AC022509.4-201ENST00000621404 572 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC120349.2-201ENST00000625002 298 ntBASIC3.08□□□□□ -1.92
LIM2P55344 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
LIM2P55344 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 MIR4278-201ENST00000636094 69 ntBASIC3.08□□□□□ -1.92
LIM2P55344 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.08□□□□□ -1.92
LIM2P55344 MTND2P41-201ENST00000637599 773 ntBASIC3.08□□□□□ -1.92
LIM2P55344 MTCO1P23-201ENST00000415223 1526 ntBASIC3.08□□□□□ -1.92
LIM2P55344 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 SRP72P2-201ENST00000344851 1979 ntBASIC3.07□□□□□ -1.92
LIM2P55344 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LIM2P55344 SNORD82-201ENST00000365530 70 ntBASIC3.07□□□□□ -1.92
LIM2P55344 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 Y_RNA.472-201ENST00000384322 102 ntBASIC3.07□□□□□ -1.92
LIM2P55344 MIR34B-201ENST00000385076 84 ntBASIC3.07□□□□□ -1.92
LIM2P55344 TAF9BP1-201ENST00000396646 746 ntBASIC3.07□□□□□ -1.92
LIM2P55344 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 AL583834.1-201ENST00000406943 343 ntBASIC3.07□□□□□ -1.92
LIM2P55344 RNU2-37P-201ENST00000410695 177 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC013410.2-201ENST00000422627 201 ntBASIC3.07□□□□□ -1.92
LIM2P55344 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.07□□□□□ -1.92
LIM2P55344 USP9YP24-201ENST00000434374 697 ntBASIC3.07□□□□□ -1.92
LIM2P55344 EEF1A1P39-201ENST00000440791 250 ntBASIC3.07□□□□□ -1.92
LIM2P55344 OR10R1P-201ENST00000441524 1141 ntBASIC3.07□□□□□ -1.92
LIM2P55344 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.07□□□□□ -1.92
LIM2P55344 USP9YP17-201ENST00000444617 696 ntBASIC3.07□□□□□ -1.92
LIM2P55344 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.07□□□□□ -1.92
LIM2P55344 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LIM2P55344 DUXAP8-207ENST00000456786 622 ntBASIC3.07□□□□□ -1.92
LIM2P55344 RPS20P24-201ENST00000457473 361 ntBASIC3.07□□□□□ -1.92
LIM2P55344 RPL9P32-201ENST00000464118 620 ntBASIC3.07□□□□□ -1.92
LIM2P55344 RN7SL601P-201ENST00000471221 293 ntBASIC3.07□□□□□ -1.92
LIM2P55344 RPL7P49-201ENST00000471402 708 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
LIM2P55344 SLC25A15P5-201ENST00000508033 253 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.07□□□□□ -1.92
LIM2P55344 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.07□□□□□ -1.92
LIM2P55344 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.07□□□□□ -1.92
LIM2P55344 MTCYBP41-201ENST00000528913 1123 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.07□□□□□ -1.92
LIM2P55344 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.07□□□□□ -1.92
LIM2P55344 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.07□□□□□ -1.92
LIM2P55344 ZNF415P1-201ENST00000582279 1166 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC022146.1-201ENST00000595307 847 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC069304.2-201ENST00000605154 435 ntBASIC3.07□□□□□ -1.92
LIM2P55344 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.07□□□□□ -1.92
LIM2P55344 DUXAP10-204ENST00000612052 616 ntBASIC3.07□□□□□ -1.92
LIM2P55344 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
LIM2P55344 AC022960.3-201ENST00000619794 441 ntBASIC3.07□□□□□ -1.92
LIM2P55344 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 373.9 ms