Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC244035.1-201ENST00000430042 390 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC083863.1-201ENST00000438811 231 ntBASIC3.54□□□□□ -1.84
CDH11P55287 RPS29P7-201ENST00000439662 171 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 RPL29P29-201ENST00000448725 423 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AL445669.2-201ENST00000454425 421 ntBASIC3.54□□□□□ -1.84
CDH11P55287 RN7SL132P-201ENST00000478131 296 ntBASIC3.54□□□□□ -1.84
CDH11P55287 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AC117532.1-201ENST00000514638 323 ntBASIC3.54□□□□□ -1.84
CDH11P55287 RNA5SP309-201ENST00000516670 106 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH11P55287 COX6CP8-201ENST00000522620 226 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AC099489.2-201ENST00000574976 260 ntBASIC3.54□□□□□ -1.84
CDH11P55287 MIR4458-201ENST00000578872 75 ntBASIC3.54□□□□□ -1.84
CDH11P55287 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AL159169.3-201ENST00000608871 561 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AL357080.1-201ENST00000617394 239 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AL139089.1-201ENST00000620372 975 ntBASIC3.54□□□□□ -1.84
CDH11P55287 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AC006927.3-201ENST00000638789 384 ntBASIC3.54□□□□□ -1.84
CDH11P55287 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDH11P55287 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CDH11P55287 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 MTCO1P24-201ENST00000515438 1558 ntBASIC3.54□□□□□ -1.84
CDH11P55287 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 AL672167.1-206ENST00000356293 943 ntBASIC3.53□□□□□ -1.84
CDH11P55287 RNU4-21P-201ENST00000362802 126 ntBASIC3.53□□□□□ -1.84
CDH11P55287 SNORD82-201ENST00000365530 70 ntBASIC3.53□□□□□ -1.84
CDH11P55287 RNU6-339P-201ENST00000384310 107 ntBASIC3.53□□□□□ -1.84
CDH11P55287 RPL7P8-201ENST00000411964 730 ntBASIC3.53□□□□□ -1.84
CDH11P55287 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 RPL36AP36-201ENST00000418616 301 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC083875.1-201ENST00000419509 405 ntBASIC3.53□□□□□ -1.84
CDH11P55287 SEPT2P1-201ENST00000419651 180 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 TRIM60P18-201ENST00000441518 828 ntBASIC3.53□□□□□ -1.84
CDH11P55287 RANP8-201ENST00000444720 713 ntBASIC3.53□□□□□ -1.84
CDH11P55287 TAF9P1-201ENST00000445421 515 ntBASIC3.53□□□□□ -1.84
CDH11P55287 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 AC005297.2-201ENST00000450430 606 ntBASIC3.53□□□□□ -1.84
CDH11P55287 KATNBL1P6-201ENST00000453433 915 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC098824.1-201ENST00000453565 980 ntBASIC3.53□□□□□ -1.84
CDH11P55287 TAF9P2-201ENST00000454958 515 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC091564.1-201ENST00000464563 479 ntBASIC3.53□□□□□ -1.84
CDH11P55287 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 AC080014.1-201ENST00000496877 1201 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 AC093809.1-201ENST00000509155 340 ntBASIC3.53□□□□□ -1.84
CDH11P55287 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 RNU1-45P-201ENST00000517191 141 ntBASIC3.53□□□□□ -1.84
CDH11P55287 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 GTF2IP22-201ENST00000554443 182 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH11P55287 AC074050.1-201ENST00000563247 211 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC012435.1-202ENST00000568772 240 ntBASIC3.53□□□□□ -1.84
CDH11P55287 RN7SL703P-201ENST00000578485 302 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.53□□□□□ -1.84
CDH11P55287 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH11P55287 AC004223.2-201ENST00000590309 544 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AP001981.2-201ENST00000603241 418 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC115621.1-201ENST00000604653 858 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC135507.1-201ENST00000607214 561 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC073968.1-201ENST00000618594 637 ntBASIC3.53□□□□□ -1.84
CDH11P55287 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 Z69908.1-201ENST00000622603 247 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC004009.2-201ENST00000623016 728 ntBASIC3.53□□□□□ -1.84
CDH11P55287 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH11P55287 AC127502.3-201ENST00000636170 1206 ntBASIC3.53□□□□□ -1.84
CDH11P55287 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH11P55287 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CDH11P55287 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.53□□□□□ -1.85
CDH11P55287 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH11P55287 RNA5SP399-201ENST00000364003 117 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms