Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCS2P54868 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCS2P54868 AC103783.1-201ENST00000520506 373 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCS2P54868 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCS2P54868 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCS2P54868 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCS2P54868 AC141257.3-201ENST00000572906 215 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCS2P54868 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS2P54868 AC007687.1-201ENST00000602704 304 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 ATP1B3P1-201ENST00000605365 821 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AP000238.1-201ENST00000608759 426 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AP005137.2-201ENST00000609238 400 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AL359535.1-201ENST00000612100 1087 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AL138478.1-201ENST00000612252 832 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AC010975.3-201ENST00000618727 978 ntBASIC3.47□□□□□ -1.85
HMGCS2P54868 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCS2P54868 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS2P54868 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCS2P54868 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS2P54868 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS2P54868 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS2P54868 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HMGCS2P54868 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGCS2P54868 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 RNU6-224P-201ENST00000384055 107 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 RNU6-1293P-201ENST00000384077 107 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 Y_RNA.578-201ENST00000390903 88 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 EIF5P1-201ENST00000400019 1231 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 SFR1P1-201ENST00000403720 688 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 RNU4-22P-201ENST00000411058 166 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 MTATP6P20-201ENST00000414147 562 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGCS2P54868 PTP4A1P5-201ENST00000420305 455 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AL139281.1-201ENST00000422120 335 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 OR51AB1P-201ENST00000429046 620 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 NPM1P13-201ENST00000452663 865 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 RPL31P50-201ENST00000471002 296 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AC126121.1-201ENST00000482313 553 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC111000.2-201ENST00000507775 550 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AC118282.2-201ENST00000508739 374 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGCS2P54868 MTND1P24-201ENST00000552175 861 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 SERPINE4P-201ENST00000554978 281 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AL158211.1-201ENST00000566763 763 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 HMGB1P6-201ENST00000569046 646 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC022146.1-201ENST00000595307 847 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AC103881.1-201ENST00000603476 538 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC007318.2-201ENST00000620999 243 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 RNU6-156P-201ENST00000621869 107 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AC008993.2-201ENST00000631744 806 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCS2P54868 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCS2P54868 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HMGCS2P54868 AL136360.1-201ENST00000503377 1900 ntBASIC3.46□□□□□ -1.86
HMGCS2P54868 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGCS2P54868 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 RNA5SP189-201ENST00000364920 115 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCS2P54868 SNORA51.12-201ENST00000384448 134 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 MTCO2P31-201ENST00000402702 684 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AL079342.2-201ENST00000403367 482 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC092648.1-201ENST00000425870 423 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCS2P54868 MTND2P5-201ENST00000432656 1006 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCS2P54868 AC004865.1-201ENST00000442276 1003 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGCS2P54868 MRPL42P4-201ENST00000453267 443 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 snoU13.7-201ENST00000459220 104 ntBASIC3.45□□□□□ -1.86
HMGCS2P54868 AC092451.1-201ENST00000480211 153 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms