Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLTCL1P53675 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CLTCL1P53675 AL161431.1-201ENST00000618966 4205 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.02□□□□□ -1.93
CLTCL1P53675 AL356292.1-201ENST00000283110 373 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLTCL1P53675 AC004866.2-201ENST00000438285 481 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 RNA5SP402-201ENST00000517148 110 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 YWHAEP7-203ENST00000622054 312 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
CLTCL1P53675 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLTCL1P53675 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLTCL1P53675 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.02□□□□□ -1.93
CLTCL1P53675 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLTCL1P53675 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC027673.1-201ENST00000456245 405 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 RPL7P5-201ENST00000471472 736 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 AC010265.1-201ENST00000513509 211 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AL356575.1-201ENST00000603008 283 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 DCAF13P3-201ENST00000561147 1334 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 MTND4P35-201ENST00000604257 1375 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLTCL1P53675 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLTCL1P53675 SNORA80E-201ENST00000384744 137 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLTCL1P53675 RAD23BP2-201ENST00000416003 1207 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.01□□□□□ -1.93
CLTCL1P53675 RPL23AP42-201ENST00000471152 471 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC068339.2-201ENST00000534395 618 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.01□□□□□ -1.93
CLTCL1P53675 AC060766.3-201ENST00000591442 263 ntBASIC3.01□□□□□ -1.93
CLTCL1P53675 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.01□□□□□ -1.93
CLTCL1P53675 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLTCL1P53675 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3□□□□□ -1.93
CLTCL1P53675 AC080128.1-201ENST00000474389 1917 ntBASIC3□□□□□ -1.93
CLTCL1P53675 HSP90AA5P-201ENST00000438353 2192 ntBASIC3□□□□□ -1.93
CLTCL1P53675 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
CLTCL1P53675 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLTCL1P53675 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3□□□□□ -1.93
CLTCL1P53675 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3□□□□□ -1.93
CLTCL1P53675 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CLTCL1P53675 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3□□□□□ -1.93
CLTCL1P53675 AC087190.1-201ENST00000484462 480 ntBASIC3□□□□□ -1.93
CLTCL1P53675 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3□□□□□ -1.93
CLTCL1P53675 TRAV31-201ENST00000502780 342 ntBASIC3□□□□□ -1.93
CLTCL1P53675 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3□□□□□ -1.93
CLTCL1P53675 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
CLTCL1P53675 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3□□□□□ -1.93
CLTCL1P53675 AP001004.1-201ENST00000582468 324 ntBASIC3□□□□□ -1.93
CLTCL1P53675 MIR5002-201ENST00000584713 97 ntBASIC3□□□□□ -1.93
CLTCL1P53675 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLTCL1P53675 AL450326.2-201ENST00000421913 1962 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
CLTCL1P53675 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLTCL1P53675 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLTCL1P53675 MTND5P28-201ENST00000438005 1594 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 RNU6-1159P-201ENST00000362933 107 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 AL445646.1-201ENST00000431784 216 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 SETP8-201ENST00000435341 628 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 AC003989.2-201ENST00000440224 169 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.99□□□□□ -1.93
CLTCL1P53675 RN7SKP219-201ENST00000516825 296 ntBASIC2.99□□□□□ -1.93
CLTCL1P53675 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLTCL1P53675 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLTCL1P53675 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.98□□□□□ -1.93
CLTCL1P53675 AC025125.1-201ENST00000624743 1922 ntBASIC2.98□□□□□ -1.93
CLTCL1P53675 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLTCL1P53675 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.98□□□□□ -1.93
CLTCL1P53675 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.98□□□□□ -1.93
CLTCL1P53675 AP000926.1-201ENST00000479573 241 ntBASIC2.98□□□□□ -1.93
CLTCL1P53675 LRRC37A5P-203ENST00000580181 585 ntBASIC2.98□□□□□ -1.93
CLTCL1P53675 AP000942.3-201ENST00000603702 160 ntBASIC2.98□□□□□ -1.93
CLTCL1P53675 AL592045.1-201ENST00000429867 352 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 USP9YP8-201ENST00000441913 500 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 RPL38P4-201ENST00000502376 214 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 MTND5P4-201ENST00000514978 288 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 AP004247.3-201ENST00000608682 624 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 SNORA17.3-201ENST00000391159 129 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 AL035551.1-201ENST00000446931 348 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.97□□□□□ -1.93
CLTCL1P53675 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLTCL1P53675 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.97□□□□□ -1.93
CLTCL1P53675 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLTCL1P53675 AL353997.5-201ENST00000618886 171 ntBASIC2.97□□□□□ -1.93
CLTCL1P53675 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CLTCL1P53675 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.96□□□□□ -1.93
CLTCL1P53675 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.96□□□□□ -1.94
CLTCL1P53675 ZNF271P-202ENST00000465539 1970 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLTCL1P53675 Y_RNA.118-201ENST00000363300 101 ntBASIC2.96□□□□□ -1.94
CLTCL1P53675 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.96□□□□□ -1.94
CLTCL1P53675 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.96□□□□□ -1.94
CLTCL1P53675 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.96□□□□□ -1.94
CLTCL1P53675 GOLGA5P1-201ENST00000507317 980 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms