Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.13□□□□□ -1.91
EFNA3P52797 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 AC099786.3-201ENST00000565735 1410 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
EFNA3P52797 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 snoZ40.1-201ENST00000364540 72 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 SNORD82-201ENST00000365530 70 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 RNU2-42P-201ENST00000410697 113 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 HMGN1P24-201ENST00000412282 298 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.13□□□□□ -1.91
EFNA3P52797 FNDC3CP-201ENST00000420795 1155 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AC244098.2-201ENST00000422068 99 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC241584.1-201ENST00000438469 1241 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 ATP5C1P1-201ENST00000441945 895 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.13□□□□□ -1.91
EFNA3P52797 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.13□□□□□ -1.91
EFNA3P52797 ACTG1P13-201ENST00000486987 1043 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 PHBP14-201ENST00000512887 367 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 ARL2BPP5-201ENST00000523141 481 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AP001189.2-201ENST00000527320 189 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
EFNA3P52797 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AL669831.4-202ENST00000590817 238 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.13□□□□□ -1.91
EFNA3P52797 SNRPGP15-201ENST00000600149 222 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.13□□□□□ -1.91
EFNA3P52797 AC009464.1-201ENST00000615731 469 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AL078595.3-201ENST00000623815 1166 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AC048347.1-201ENST00000624621 427 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 AP001002.2-201ENST00000625137 386 ntBASIC3.13□□□□□ -1.91
EFNA3P52797 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.13□□□□□ -1.91
EFNA3P52797 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.13□□□□□ -1.91
EFNA3P52797 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
EFNA3P52797 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
EFNA3P52797 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EFNA3P52797 RNU4-51P-201ENST00000364206 140 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC016769.3-201ENST00000396562 315 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 HSPE1P26-201ENST00000405341 275 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.12□□□□□ -1.91
EFNA3P52797 AL161449.1-201ENST00000414531 1199 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 GTF2IP23-201ENST00000423746 351 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 MTCO2P17-201ENST00000424336 677 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EFNA3P52797 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.12□□□□□ -1.91
EFNA3P52797 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 MTND2P5-201ENST00000432656 1006 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.12□□□□□ -1.91
EFNA3P52797 OR10R1P-201ENST00000441524 1141 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 MTCO1P48-201ENST00000448024 1096 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 MRPS31P2-201ENST00000451581 518 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.12□□□□□ -1.91
EFNA3P52797 PABPC1P3-201ENST00000469174 459 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 SYPL1P1-201ENST00000473622 768 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 RPL23AP44-201ENST00000482216 473 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC108078.3-201ENST00000502633 489 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 OR5H5P-201ENST00000503164 928 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 BOLA3P3-201ENST00000505182 232 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 PCBP2P3-201ENST00000509726 843 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
EFNA3P52797 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 MTCYBP27-201ENST00000555160 670 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 SULT1C2P1-202ENST00000562418 459 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC010928.3-201ENST00000587712 541 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.12□□□□□ -1.91
EFNA3P52797 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.12□□□□□ -1.91
EFNA3P52797 VN1R83P-201ENST00000595685 445 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 CKS1BP3-201ENST00000600888 237 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AL606834.2-201ENST00000602954 668 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
EFNA3P52797 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 AC091946.2-201ENST00000606105 291 ntBASIC3.12□□□□□ -1.91
EFNA3P52797 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms