Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC010587.2-201ENST00000511727 448 ntBASIC4.33□□□□□ -1.72
CTCFP49711 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.33□□□□□ -1.72
CTCFP49711 SLC2A13P1-201ENST00000531560 322 ntBASIC4.33□□□□□ -1.72
CTCFP49711 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.33□□□□□ -1.72
CTCFP49711 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.33□□□□□ -1.72
CTCFP49711 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.33□□□□□ -1.72
CTCFP49711 LSM6P2-201ENST00000552208 177 ntBASIC4.33□□□□□ -1.72
CTCFP49711 DUXAP1-201ENST00000556632 463 ntBASIC4.33□□□□□ -1.72
CTCFP49711 AC009094.1-201ENST00000564443 426 ntBASIC4.33□□□□□ -1.72
CTCFP49711 AL354943.1-201ENST00000572103 781 ntBASIC4.33□□□□□ -1.72
CTCFP49711 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.33□□□□□ -1.72
CTCFP49711 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.33□□□□□ -1.72
CTCFP49711 AL606834.2-201ENST00000602954 668 ntBASIC4.33□□□□□ -1.72
CTCFP49711 AC069304.2-201ENST00000605154 435 ntBASIC4.33□□□□□ -1.72
CTCFP49711 MIR1322-201ENST00000638013 71 ntBASIC4.33□□□□□ -1.72
CTCFP49711 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.33□□□□□ -1.72
CTCFP49711 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTCFP49711 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTCFP49711 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTCFP49711 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTCFP49711 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTCFP49711 AC130650.2-201ENST00000618736 2403 ntBASIC4.32□□□□□ -1.72
CTCFP49711 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTCFP49711 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTCFP49711 Y_RNA.311-201ENST00000365068 96 ntBASIC4.32□□□□□ -1.72
CTCFP49711 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 RSL24D1P4-201ENST00000400938 484 ntBASIC4.32□□□□□ -1.72
CTCFP49711 MIR1183-201ENST00000408856 89 ntBASIC4.32□□□□□ -1.72
CTCFP49711 HSFY4P-201ENST00000415994 1181 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 MTATP6P17-201ENST00000431030 672 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 FTH1P1-201ENST00000437933 532 ntBASIC4.32□□□□□ -1.72
CTCFP49711 MTND2P20-201ENST00000440805 661 ntBASIC4.32□□□□□ -1.72
CTCFP49711 MTND3P1-201ENST00000441336 220 ntBASIC4.32□□□□□ -1.72
CTCFP49711 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
CTCFP49711 NANOGNBP1-201ENST00000448444 480 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.32□□□□□ -1.72
CTCFP49711 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 TRBV26-201ENST00000456572 344 ntBASIC4.32□□□□□ -1.72
CTCFP49711 RPL9P32-201ENST00000464118 620 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.32□□□□□ -1.72
CTCFP49711 AC068587.2-201ENST00000478386 781 ntBASIC4.32□□□□□ -1.72
CTCFP49711 RPL7P38-201ENST00000488396 739 ntBASIC4.32□□□□□ -1.72
CTCFP49711 HMGB1P28-201ENST00000507778 552 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.32□□□□□ -1.72
CTCFP49711 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.32□□□□□ -1.72
CTCFP49711 DUXAP5-201ENST00000529668 529 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 AC092470.1-201ENST00000546187 132 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.32□□□□□ -1.72
CTCFP49711 MIR5680-201ENST00000577577 84 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC006116.10-201ENST00000591836 581 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC009220.3-201ENST00000604318 586 ntBASIC4.32□□□□□ -1.72
CTCFP49711 TUG1_1.1-201ENST00000610654 145 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC008083.4-201ENST00000615076 444 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC231759.1-201ENST00000616455 597 ntBASIC4.32□□□□□ -1.72
CTCFP49711 AC092184.1-201ENST00000625042 715 ntBASIC4.32□□□□□ -1.72
CTCFP49711 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
CTCFP49711 HSPA8P1-201ENST00000425843 1833 ntBASIC4.32□□□□□ -1.72
CTCFP49711 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTCFP49711 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTCFP49711 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTCFP49711 AL353746.1-201ENST00000566293 6881 ntBASIC4.31□□□□□ -1.72
CTCFP49711 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
CTCFP49711 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTCFP49711 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTCFP49711 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTCFP49711 AL445529.1-201ENST00000398713 389 ntBASIC4.31□□□□□ -1.72
CTCFP49711 RNU6-757P-201ENST00000410334 100 ntBASIC4.31□□□□□ -1.72
CTCFP49711 RN7SKP56-201ENST00000410513 331 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTCFP49711 VPS26BP1-201ENST00000417155 755 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AC006960.1-201ENST00000419980 153 ntBASIC4.31□□□□□ -1.72
CTCFP49711 OR51AB1P-201ENST00000429046 620 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AC006028.1-201ENST00000438379 402 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AF228730.2-201ENST00000438784 848 ntBASIC4.31□□□□□ -1.72
CTCFP49711 MTND1P16-201ENST00000465177 898 ntBASIC4.31□□□□□ -1.72
CTCFP49711 RPL7P18-201ENST00000478965 734 ntBASIC4.31□□□□□ -1.72
CTCFP49711 OR4G11P-201ENST00000492842 939 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 RNY4P37-201ENST00000516225 96 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 OR4A45P-201ENST00000529954 901 ntBASIC4.31□□□□□ -1.72
CTCFP49711 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.31□□□□□ -1.72
CTCFP49711 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.31□□□□□ -1.72
CTCFP49711 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.31□□□□□ -1.72
CTCFP49711 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms