Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 VDAC1P9-201ENST00000412766 841 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AC244035.1-201ENST00000430042 390 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AP000542.1-201ENST00000448473 371 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 BTF3P5-201ENST00000457252 467 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 RPL21P11-201ENST00000461458 483 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AP001486.1-201ENST00000463339 476 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 MTND5P13-201ENST00000513046 1079 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.53□□□□□ -1.68
TM4SF4P48230 RNU6-714P-201ENST00000516963 103 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.53□□□□□ -1.68
TM4SF4P48230 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AC011260.1-201ENST00000578420 472 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.53□□□□□ -1.68
TM4SF4P48230 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 MIR3936-201ENST00000584304 110 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC008507.1-201ENST00000587506 734 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 TPMTP1-201ENST00000592307 737 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC244505.7-201ENST00000599675 272 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC011451.2-201ENST00000604303 598 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 MIR8069-1-201ENST00000616627 86 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 MIR8069-2-201ENST00000621412 86 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 C2orf27A-204ENST00000623058 969 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 AC079597.1-201ENST00000624306 508 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.53□□□□□ -1.68
TM4SF4P48230 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM4SF4P48230 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM4SF4P48230 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AL049780.3-201ENST00000624612 1583 ntBASIC4.53□□□□□ -1.69
TM4SF4P48230 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AC006378.2-201ENST00000623178 2476 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TM4SF4P48230 RNU6-343P-201ENST00000364709 104 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 RNA5SP167-201ENST00000365461 116 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 RNU6-1181P-201ENST00000384191 106 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 RPL17P12-201ENST00000413391 526 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 NPM1P11-201ENST00000417106 855 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AC244098.2-201ENST00000422068 99 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.52□□□□□ -1.69
TM4SF4P48230 EZH2P1-201ENST00000431167 291 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.52□□□□□ -1.69
TM4SF4P48230 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 RPS20P32-201ENST00000456044 356 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 RN7SL601P-201ENST00000471221 293 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 HMGB1P36-201ENST00000487709 576 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 MTND4LP18-201ENST00000526864 291 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.52□□□□□ -1.69
TM4SF4P48230 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.52□□□□□ -1.69
TM4SF4P48230 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.52□□□□□ -1.69
TM4SF4P48230 RNU1-30P-201ENST00000606575 163 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AL031775.1-201ENST00000607014 887 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AL590099.1-201ENST00000615276 138 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 AL356585.4-201ENST00000623078 1229 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AC093591.3-201ENST00000634516 308 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.52□□□□□ -1.69
TM4SF4P48230 AL365440.1-201ENST00000436135 2167 ntBASIC4.52□□□□□ -1.69
TM4SF4P48230 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM4SF4P48230 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TM4SF4P48230 MTCO1P9-201ENST00000505577 1534 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TM4SF4P48230 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TM4SF4P48230 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
TM4SF4P48230 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.51□□□□□ -1.69
TM4SF4P48230 RNU6-712P-201ENST00000410558 100 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.51□□□□□ -1.69
TM4SF4P48230 AC127526.1-201ENST00000417526 366 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.51□□□□□ -1.69
TM4SF4P48230 RPS6P12-201ENST00000432491 726 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 AC236972.1-201ENST00000433225 199 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 UBE2V1P13-201ENST00000436983 439 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 RPL23AP89-201ENST00000439324 255 ntBASIC4.51□□□□□ -1.69
TM4SF4P48230 AC108734.1-201ENST00000439549 399 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms