Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
HTTP42858 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
HTTP42858 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.25□□□□□ -2.05
HTTP42858 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.25□□□□□ -2.05
HTTP42858 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HTTP42858 AC090543.1-201ENST00000492168 485 ntBASIC2.25□□□□□ -2.05
HTTP42858 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.25□□□□□ -2.05
HTTP42858 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.25□□□□□ -2.05
HTTP42858 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HTTP42858 HMGB1P31-201ENST00000437242 427 ntBASIC2.24□□□□□ -2.05
HTTP42858 RPS27P29-201ENST00000463110 252 ntBASIC2.24□□□□□ -2.05
HTTP42858 MLLT10P2-201ENST00000506434 249 ntBASIC2.24□□□□□ -2.05
HTTP42858 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
HTTP42858 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HTTP42858 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HTTP42858 AL627390.1-201ENST00000396055 340 ntBASIC2.24□□□□□ -2.05
HTTP42858 AC008173.1-201ENST00000418901 264 ntBASIC2.24□□□□□ -2.05
HTTP42858 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.24□□□□□ -2.05
HTTP42858 AL445669.2-201ENST00000454425 421 ntBASIC2.24□□□□□ -2.05
HTTP42858 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.24□□□□□ -2.05
HTTP42858 BX248123.2-201ENST00000606318 124 ntBASIC2.24□□□□□ -2.05
HTTP42858 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.24□□□□□ -2.05
HTTP42858 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HTTP42858 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
HTTP42858 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HTTP42858 RPS15AP17-201ENST00000470598 390 ntBASIC2.24□□□□□ -2.05
HTTP42858 RPL9P33-201ENST00000484311 566 ntBASIC2.24□□□□□ -2.05
HTTP42858 RNU6-250P-201ENST00000516958 103 ntBASIC2.24□□□□□ -2.05
HTTP42858 AC090281.1-201ENST00000523019 276 ntBASIC2.24□□□□□ -2.05
HTTP42858 AL390334.1-201ENST00000556395 450 ntBASIC2.24□□□□□ -2.05
HTTP42858 RMST_2.1-201ENST00000617263 136 ntBASIC2.24□□□□□ -2.05
HTTP42858 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HTTP42858 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HTTP42858 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HTTP42858 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HTTP42858 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.23□□□□□ -2.05
HTTP42858 MTAPP1-201ENST00000489154 819 ntBASIC2.23□□□□□ -2.05
HTTP42858 RPS27P27-201ENST00000498779 255 ntBASIC2.23□□□□□ -2.05
HTTP42858 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.23□□□□□ -2.05
HTTP42858 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.23□□□□□ -2.05
HTTP42858 MIR8081-201ENST00000611533 95 ntBASIC2.23□□□□□ -2.05
HTTP42858 KPNA2P1-201ENST00000458289 1591 ntBASIC2.23□□□□□ -2.05
HTTP42858 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HTTP42858 U8.8-201ENST00000365399 135 ntBASIC2.23□□□□□ -2.05
HTTP42858 RNU1-138P-201ENST00000384093 164 ntBASIC2.23□□□□□ -2.05
HTTP42858 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.23□□□□□ -2.05
HTTP42858 OR4P1P-201ENST00000530808 1136 ntBASIC2.23□□□□□ -2.05
HTTP42858 MIR6733-201ENST00000635723 61 ntBASIC2.23□□□□□ -2.05
HTTP42858 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.23□□□□□ -2.05
HTTP42858 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HTTP42858 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.22□□□□□ -2.05
HTTP42858 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.22□□□□□ -2.05
HTTP42858 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.22□□□□□ -2.05
HTTP42858 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.22□□□□□ -2.05
HTTP42858 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
HTTP42858 RPL23AP61-201ENST00000623642 466 ntBASIC2.22□□□□□ -2.05
HTTP42858 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 AL138878.1-201ENST00000405131 347 ntBASIC2.22□□□□□ -2.05
HTTP42858 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.22□□□□□ -2.05
HTTP42858 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.22□□□□□ -2.05
HTTP42858 RPS7P5-201ENST00000441482 581 ntBASIC2.22□□□□□ -2.05
HTTP42858 GAPDHP27-201ENST00000447427 1020 ntBASIC2.22□□□□□ -2.05
HTTP42858 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.22□□□□□ -2.05
HTTP42858 AC025260.1-201ENST00000548858 430 ntBASIC2.22□□□□□ -2.05
HTTP42858 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HTTP42858 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.22□□□□□ -2.05
HTTP42858 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.22□□□□□ -2.05
HTTP42858 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HTTP42858 AC007342.7-201ENST00000624610 2337 ntBASIC2.22□□□□□ -2.05
HTTP42858 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.05
HTTP42858 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
HTTP42858 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HTTP42858 Y_RNA.327-201ENST00000365201 102 ntBASIC2.21□□□□□ -2.06
HTTP42858 AC104332.2-201ENST00000429959 156 ntBASIC2.21□□□□□ -2.06
HTTP42858 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
HTTP42858 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.21□□□□□ -2.06
HTTP42858 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HTTP42858 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HTTP42858 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HTTP42858 AL021407.1-201ENST00000404531 386 ntBASIC2.21□□□□□ -2.06
HTTP42858 AL591719.1-201ENST00000444669 744 ntBASIC2.21□□□□□ -2.06
HTTP42858 AC009237.8-201ENST00000445492 379 ntBASIC2.21□□□□□ -2.06
HTTP42858 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.21□□□□□ -2.06
HTTP42858 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
HTTP42858 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HTTP42858 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HTTP42858 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HTTP42858 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
HTTP42858 SNORA67.5-201ENST00000391036 107 ntBASIC2.2□□□□□ -2.06
HTTP42858 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.2□□□□□ -2.06
HTTP42858 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms