Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 EI24P1-201ENST00000416584 867 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.08□□□□□ -1.92
SHMT2P34897 TMSB4XP1-201ENST00000424567 135 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 Z93242.1-201ENST00000427102 353 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AL512649.1-201ENST00000428997 581 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHMT2P34897 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 AC092754.2-201ENST00000463506 460 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 RPS4XP13-201ENST00000483219 789 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 RN7SL504P-201ENST00000494496 287 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.08□□□□□ -1.92
SHMT2P34897 ARL2BPP5-201ENST00000523141 481 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.08□□□□□ -1.92
SHMT2P34897 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.08□□□□□ -1.92
SHMT2P34897 MIR4474-201ENST00000579189 78 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.08□□□□□ -1.92
SHMT2P34897 AL669831.4-202ENST00000590817 238 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AL583856.2-201ENST00000606298 543 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC093673.2-201ENST00000609674 331 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC090116.1-201ENST00000615679 446 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AC010872.1-201ENST00000624225 675 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHMT2P34897 AC007256.1-201ENST00000392253 2765 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHMT2P34897 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHMT2P34897 HMGB1P5-201ENST00000255320 642 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 RNU6-707P-201ENST00000364647 95 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 RNU6-730P-201ENST00000383954 104 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC092634.6-201ENST00000418558 192 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 TOMM22P1-201ENST00000418578 312 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 RPL23AP69-201ENST00000431134 458 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.07□□□□□ -1.92
SHMT2P34897 SYPL1P1-201ENST00000473622 768 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC017015.1-201ENST00000477387 286 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.07□□□□□ -1.92
SHMT2P34897 NCOR1P1-202ENST00000486162 291 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC006483.1-201ENST00000487308 313 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHMT2P34897 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHMT2P34897 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 RNU6-1028P-201ENST00000517164 93 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 MTCO3P15-201ENST00000526563 574 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 NDUFS5P6-201ENST00000529136 295 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC093519.1-201ENST00000566109 298 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC012493.2-201ENST00000595083 291 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC011468.4-201ENST00000603942 409 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AP003973.1-201ENST00000604639 691 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AL513477.2-201ENST00000607858 568 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC006023.2-201ENST00000609916 167 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC018692.3-201ENST00000623929 123 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AL512506.2-201ENST00000624472 458 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AL138960.2-201ENST00000625145 535 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 OR5BR1P-201ENST00000524992 1330 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SHMT2P34897 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
SHMT2P34897 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SHMT2P34897 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHMT2P34897 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
SHMT2P34897 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SHMT2P34897 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
SHMT2P34897 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.06□□□□□ -1.92
SHMT2P34897 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 MT-TC-201ENST00000387405 66 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.06□□□□□ -1.92
SHMT2P34897 AL133264.1-201ENST00000407157 562 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AL023807.1-201ENST00000407932 359 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 FNDC3CP-201ENST00000420795 1155 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.06□□□□□ -1.92
SHMT2P34897 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHMT2P34897 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.06□□□□□ -1.92
SHMT2P34897 MTND5P24-201ENST00000438892 1767 ntBASIC3.06□□□□□ -1.92
SHMT2P34897 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
SHMT2P34897 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms