| TFE3 | P19532 | RNU11-4P-201 | ENST00000391149 | 133 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC005522.1-201 | ENST00000395416 | 346 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL592114.1-201 | ENST00000403842 | 483 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-387P-201 | ENST00000411331 | 105 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | CYCSP10-201 | ENST00000417973 | 294 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MTND2P23-201 | ENST00000422990 | 651 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL158835.2-201 | ENST00000430970 | 300 nt | TSL 2 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | LYPLA1P1-201 | ENST00000434514 | 622 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AF064858.2-201 | ENST00000440714 | 292 nt | TSL 3 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC245028.2-201 | ENST00000458673 | 253 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-1208P-201 | ENST00000459588 | 107 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RN7SL443P-201 | ENST00000464331 | 290 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC097484.1-201 | ENST00000471148 | 389 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MORC1-AS1-201 | ENST00000480826 | 564 nt | TSL 2 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC068587.1-201 | ENST00000483613 | 781 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC004069.1-201 | ENST00000504082 | 549 nt | TSL 4 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | BACH1-IT1-201 | ENST00000504298 | 821 nt | TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | LINC00492-201 | ENST00000504436 | 593 nt | TSL 3 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC010350.1-201 | ENST00000504908 | 231 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MRPL36-203 | ENST00000505818 | 595 nt | APPRIS P1 TSL 3 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC131956.2-201 | ENST00000510922 | 512 nt | TSL 3 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-864P-201 | ENST00000516256 | 108 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6ATAC24P-201 | ENST00000516811 | 135 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | SNORA25.17-201 | ENST00000517184 | 124 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC103783.1-201 | ENST00000520506 | 373 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | GSTP1P1-201 | ENST00000548078 | 319 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | CR383656.7-201 | ENST00000548164 | 174 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL352955.1-201 | ENST00000555490 | 332 nt | TSL 3 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC099518.4-202 | ENST00000576433 | 455 nt | TSL 2 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC105254.2-201 | ENST00000603636 | 436 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AP001330.4-201 | ENST00000604350 | 154 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL031176.1-201 | ENST00000604554 | 466 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AP001836.1-201 | ENST00000604675 | 523 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AP000942.4-201 | ENST00000604811 | 241 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL592436.1-201 | ENST00000605135 | 558 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | SDR42E1P1-201 | ENST00000611327 | 477 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC011155.2-201 | ENST00000623202 | 216 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL033384.1-202 | ENST00000431554 | 3104 nt | TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | CLSPN-206 | ENST00000520551 | 4010 nt | TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | OFD1P9Y-201 | ENST00000417699 | 1491 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | C2CD6-202 | ENST00000439140 | 5512 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | TBC1D23-201 | ENST00000344949 | 3656 nt | APPRIS P1 TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | A1CF-205 | ENST00000374001 | 9221 nt | APPRIS ALT1 TSL 5 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | PSG1-201 | ENST00000244296 | 2276 nt | APPRIS P3 TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | HAT1-201 | ENST00000264108 | 1626 nt | APPRIS P1 TSL 1 (best) BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | CNTN5-201 | ENST00000279463 | 5925 nt | TSL 5 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MTND5P3-201 | ENST00000438536 | 1800 nt | BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | PHLDB2-214 | ENST00000495180 | 4159 nt | TSL 2 BASIC | 5.3 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL499616.1-201 | ENST00000415437 | 2633 nt | TSL 2 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | SCN11A-202 | ENST00000444237 | 5729 nt | APPRIS ALT2 TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | LINC01592-202 | ENST00000518540 | 2367 nt | TSL 2 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | PLCB1-211 | ENST00000617005 | 6458 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | SESN1-201 | ENST00000302071 | 2718 nt | TSL 1 (best) BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | FANCI-201 | ENST00000300027 | 4713 nt | APPRIS P3 TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | C5orf42-201 | ENST00000425232 | 11199 nt | APPRIS P2 TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | PSG8-202 | ENST00000401467 | 1686 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | Y_RNA.128-201 | ENST00000363391 | 112 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-1284P-201 | ENST00000363701 | 100 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | TEX35-205 | ENST00000367643 | 802 nt | APPRIS ALT2 TSL 2 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MIR765-201 | ENST00000390226 | 114 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RPL21P67-201 | ENST00000402896 | 478 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | SNORA77-201 | ENST00000408716 | 125 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU2-47P-201 | ENST00000410649 | 186 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL136234.1-201 | ENST00000437080 | 349 nt | TSL 2 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | GTF2IP13-201 | ENST00000438487 | 386 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL139121.1-201 | ENST00000445647 | 244 nt | TSL 2 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC010655.1-201 | ENST00000449336 | 292 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | IGHV5-78-201 | ENST00000450948 | 295 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | Y_RNA.635-201 | ENST00000459041 | 101 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | BTF3P13-201 | ENST00000513224 | 490 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-559P-201 | ENST00000516151 | 98 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RNU6-1092P-201 | ENST00000516955 | 87 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC100870.1-201 | ENST00000522035 | 505 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | DEFB108D-201 | ENST00000527787 | 222 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AP003385.6-201 | ENST00000531603 | 374 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC073525.1-202 | ENST00000550049 | 732 nt | TSL 3 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | LINC01580-201 | ENST00000555255 | 561 nt | TSL 4 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC022196.1-202 | ENST00000559570 | 462 nt | TSL 3 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC020661.2-201 | ENST00000560114 | 134 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL031600.2-201 | ENST00000563223 | 307 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MIR4691-201 | ENST00000583764 | 85 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC012443.1-201 | ENST00000605605 | 231 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | USP32P2-207 | ENST00000608376 | 253 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL390240.1-201 | ENST00000612950 | 384 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | UBE2E2-206 | ENST00000613545 | 282 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | NAA60-237 | ENST00000615865 | 326 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | LINC01232-203 | ENST00000625369 | 576 nt | TSL 4 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AL133216.2-202 | ENST00000634512 | 349 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | RPGRIP1L-212 | ENST00000621565 | 6038 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | CYP3A7-CYP3A51P-201 | ENST00000611620 | 1608 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | EXOC5P1-201 | ENST00000510543 | 1969 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | KIF15-203 | ENST00000425755 | 3460 nt | TSL 5 BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | MECOM-201 | ENST00000264674 | 4900 nt | TSL 1 (best) BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | GABPAP-201 | ENST00000419271 | 1356 nt | BASIC | 5.29 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC116667.1-201 | ENST00000604855 | 2072 nt | BASIC | 5.28 | □□□□□ -1.56 | | |
| TFE3 | P19532 | AC108751.5-201 | ENST00000492880 | 1336 nt | BASIC | 5.28 | □□□□□ -1.56 | | |
| TFE3 | P19532 | NRK-204 | ENST00000540278 | 1687 nt | TSL 2 BASIC | 5.28 | □□□□□ -1.56 | | |
| TFE3 | P19532 | KLHL13-203 | ENST00000371878 | 3234 nt | TSL 2 BASIC | 5.28 | □□□□□ -1.56 | | |