Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 UBE2NP1-201ENST00000545592 458 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.26□□□□□ -1.89
XRCC1P18887 AC103881.1-201ENST00000603476 538 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AL035411.2-201ENST00000604022 421 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 YPEL5P2-201ENST00000605553 359 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 AL133445.2-201ENST00000611191 527 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.26□□□□□ -1.89
XRCC1P18887 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.26□□□□□ -1.89
XRCC1P18887 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
XRCC1P18887 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
XRCC1P18887 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
XRCC1P18887 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
XRCC1P18887 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.26□□□□□ -1.89
XRCC1P18887 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
XRCC1P18887 AL079305.1-201ENST00000623159 3008 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.25□□□□□ -1.89
XRCC1P18887 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
XRCC1P18887 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
XRCC1P18887 RNA5SP295-201ENST00000362655 121 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 SNORA51.2-201ENST00000364595 132 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.25□□□□□ -1.89
XRCC1P18887 Z75741.2-201ENST00000417272 1167 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 RAC1P8-201ENST00000427086 527 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.25□□□□□ -1.89
XRCC1P18887 RPL23AP83-201ENST00000434984 473 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.25□□□□□ -1.89
XRCC1P18887 USP9YP22-201ENST00000438971 294 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.25□□□□□ -1.89
XRCC1P18887 HMGB3P6-201ENST00000444896 598 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL358794.1-201ENST00000445689 381 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 SLC31A1P1-201ENST00000451221 567 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC092754.2-201ENST00000463506 460 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 PABPC1P3-201ENST00000469174 459 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL136126.1-201ENST00000473603 402 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC013828.1-201ENST00000481845 158 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 KCTD9P5-201ENST00000504141 1170 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.25□□□□□ -1.89
XRCC1P18887 SNORA70.24-201ENST00000517233 118 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.25□□□□□ -1.89
XRCC1P18887 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.25□□□□□ -1.89
XRCC1P18887 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.25□□□□□ -1.89
XRCC1P18887 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.25□□□□□ -1.89
XRCC1P18887 TRAV37-201ENST00000553906 342 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 MIR3912-201ENST00000577566 105 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 AL390838.2-201ENST00000602394 274 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC096947.1-201ENST00000603233 470 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC011468.4-201ENST00000603942 409 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AL158050.2-201ENST00000605336 568 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC092954.1-201ENST00000609121 445 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC008083.4-201ENST00000615076 444 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC123767.1-202ENST00000620407 817 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC009318.4-201ENST00000620496 486 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.25□□□□□ -1.89
XRCC1P18887 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 MIR3651-201ENST00000630427 90 ntBASIC3.25□□□□□ -1.89
XRCC1P18887 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
XRCC1P18887 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.25□□□□□ -1.89
XRCC1P18887 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
XRCC1P18887 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
XRCC1P18887 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
XRCC1P18887 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.25□□□□□ -1.89
XRCC1P18887 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC093908.1-201ENST00000623125 8092 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
XRCC1P18887 GDI2P1-201ENST00000429312 1336 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
XRCC1P18887 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 MIR506-201ENST00000384998 124 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 SNORD65.1-201ENST00000390889 71 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AL138880.1-201ENST00000405824 642 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 HSFY1P1-201ENST00000423928 1178 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AL035410.1-201ENST00000427409 427 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms