Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 COTL1P1-201ENST00000422309 375 ntBASIC5.04□□□□□ -1.6
ATF3P18847 SNRPEP7-201ENST00000438350 220 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF3P18847 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF3P18847 MTATP6P26-201ENST00000445926 662 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RPS20P24-201ENST00000457473 361 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 MEMO1P3-201ENST00000459811 302 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RPL5P30-201ENST00000465511 891 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RN7SL429P-201ENST00000479090 223 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RN7SL489P-201ENST00000486185 223 ntBASIC5.04□□□□□ -1.6
ATF3P18847 FAM172BP-201ENST00000487497 1089 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RN7SL327P-201ENST00000488659 223 ntBASIC5.04□□□□□ -1.6
ATF3P18847 RN7SL504P-201ENST00000494496 287 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AC012170.1-201ENST00000495139 359 ntBASIC5.04□□□□□ -1.6
ATF3P18847 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.04□□□□□ -1.6
ATF3P18847 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF3P18847 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.04□□□□□ -1.6
ATF3P18847 AC022861.1-201ENST00000522981 663 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 AL606834.2-201ENST00000602954 668 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AC072039.2-201ENST00000608883 439 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF3P18847 RN7SL853P-201ENST00000617250 223 ntBASIC5.04□□□□□ -1.6
ATF3P18847 AL031667.3-201ENST00000620124 655 ntBASIC5.04□□□□□ -1.6
ATF3P18847 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 AC007671.2-201ENST00000637344 619 ntBASIC5.04□□□□□ -1.6
ATF3P18847 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF3P18847 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF3P18847 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF3P18847 AC097714.1-201ENST00000511272 1647 ntBASIC5.04□□□□□ -1.6
ATF3P18847 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 AC011477.1-204ENST00000623416 1325 ntBASIC5.03□□□□□ -1.6
ATF3P18847 KPNA2P2-201ENST00000419546 1489 ntBASIC5.03□□□□□ -1.6
ATF3P18847 RPL21P132-201ENST00000331267 462 ntBASIC5.03□□□□□ -1.6
ATF3P18847 SNORD17-201ENST00000390930 237 ntBASIC5.03□□□□□ -1.6
ATF3P18847 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF3P18847 DBIP2-201ENST00000419076 262 ntBASIC5.03□□□□□ -1.6
ATF3P18847 USP9YP26-201ENST00000421008 661 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC093698.1-201ENST00000423843 571 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF3P18847 EEF1E1P1-201ENST00000446998 430 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF3P18847 snoU13.3-201ENST00000459441 104 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AP001992.1-205ENST00000462248 379 ntBASIC5.03□□□□□ -1.6
ATF3P18847 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF3P18847 S100A11P2-201ENST00000467589 312 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF3P18847 BZW1P2-201ENST00000473537 826 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC084198.1-201ENST00000477747 402 ntBASIC5.03□□□□□ -1.6
ATF3P18847 MTCYBP43-201ENST00000513621 740 ntBASIC5.03□□□□□ -1.6
ATF3P18847 Vault.1-201ENST00000516474 102 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF3P18847 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF3P18847 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF3P18847 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF3P18847 AC008088.1-201ENST00000580993 280 ntBASIC5.03□□□□□ -1.6
ATF3P18847 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC004908.3-201ENST00000610248 625 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC004009.2-201ENST00000623016 728 ntBASIC5.03□□□□□ -1.6
ATF3P18847 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF3P18847 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF3P18847 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF3P18847 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ATF3P18847 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF3P18847 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
ATF3P18847 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF3P18847 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF3P18847 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATF3P18847 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATF3P18847 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF3P18847 U3.29-201ENST00000391296 212 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AL603766.1-201ENST00000407763 664 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.02□□□□□ -1.61
ATF3P18847 BX323014.1-201ENST00000412876 237 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF3P18847 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.02□□□□□ -1.61
ATF3P18847 UBE2FP3-201ENST00000436366 524 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF3P18847 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF3P18847 HSPE1P28-201ENST00000443139 211 ntBASIC5.02□□□□□ -1.61
ATF3P18847 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.02□□□□□ -1.61
ATF3P18847 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATF3P18847 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF3P18847 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.02□□□□□ -1.61
ATF3P18847 RPL30P6-201ENST00000475925 342 ntBASIC5.02□□□□□ -1.61
ATF3P18847 AC010625.1-201ENST00000511296 403 ntBASIC5.02□□□□□ -1.61
ATF3P18847 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.02□□□□□ -1.61
ATF3P18847 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms