| GLI3 | P10071 | AL160394.1-201 | ENST00000624765 | 724 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LIG4-203 | ENST00000442234 | 3982 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| GLI3 | P10071 | KCNIP4-IT1-201 | ENST00000627566 | 9848 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| GLI3 | P10071 | PHKBP1-201 | ENST00000450951 | 1951 nt | BASIC | 3.02 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC093010.3-201 | ENST00000570269 | 15214 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC098798.1-201 | ENST00000503998 | 1447 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | CLOCK-201 | ENST00000309964 | 10304 nt | APPRIS P1 TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ATP6V1G3-203 | ENST00000367382 | 611 nt | APPRIS P1 TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL390198.1-201 | ENST00000376445 | 320 nt | TSL 2 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | SNORA67.3-201 | ENST00000384366 | 140 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | GSTA12P-201 | ENST00000402398 | 508 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC007390.1-201 | ENST00000415722 | 356 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC010745.4-201 | ENST00000420130 | 740 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MTCO2P17-201 | ENST00000424336 | 677 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC000111.1-201 | ENST00000441019 | 221 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | RPL7P31-201 | ENST00000450192 | 724 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | RPS27P27-201 | ENST00000498779 | 255 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MTND5P21-201 | ENST00000531961 | 522 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LINC02325-202 | ENST00000554260 | 567 nt | TSL 4 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ALDH3A2-208 | ENST00000571163 | 590 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC067838.1-201 | ENST00000606064 | 577 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | BX664608.1-201 | ENST00000610519 | 487 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | 5S_rRNA.12-201 | ENST00000617631 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AP003072.5-201 | ENST00000623872 | 773 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | RICTOR-201 | ENST00000296782 | 7505 nt | TSL 1 (best) BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AK9-203 | ENST00000368948 | 2478 nt | TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| GLI3 | P10071 | OR8K1-201 | ENST00000279783 | 1087 nt | APPRIS P1 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | TRAV24-201 | ENST00000390453 | 343 nt | APPRIS P1 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | PTP4A1P7-201 | ENST00000423476 | 514 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ELOCP13-201 | ENST00000443934 | 329 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL035551.1-201 | ENST00000446931 | 348 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | SAR1B-211 | ENST00000509937 | 455 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC091819.2-201 | ENST00000522292 | 490 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LINC02463-201 | ENST00000546414 | 497 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | STARD13-AS-208 | ENST00000589472 | 859 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC090953.1-201 | ENST00000604305 | 1092 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL161912.3-201 | ENST00000605404 | 628 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC027045.1-201 | ENST00000609065 | 202 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | DEFB128-201 | ENST00000334391 | 373 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LHFPL3-AS1-203 | ENST00000417290 | 950 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC245517.4-201 | ENST00000448601 | 281 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ZDHHC20P3-201 | ENST00000531576 | 336 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MAL2-203 | ENST00000534619 | 578 nt | TSL 4 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LINC02399-201 | ENST00000547094 | 400 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | VN1R80P-201 | ENST00000597126 | 338 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC128687.1-201 | ENST00000605304 | 619 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC016252.1-201 | ENST00000609721 | 474 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | CFTRP2-201 | ENST00000634304 | 199 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MFSD8-245 | ENST00000641743 | 948 nt | BASIC | 3 | □□□□□ -1.93 | | |
| GLI3 | P10071 | NXPE1-204 | ENST00000536271 | 2289 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | SLC30A6-202 | ENST00000357055 | 4758 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | KCNRG-201 | ENST00000312942 | 1527 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MRPL42-202 | ENST00000393128 | 1983 nt | APPRIS ALT1 TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | XKR3-201 | ENST00000331428 | 1690 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC012498.1-201 | ENST00000424037 | 437 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC009969.1-201 | ENST00000438726 | 172 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL353093.1-201 | ENST00000441292 | 436 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC016556.1-201 | ENST00000510004 | 935 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC025423.2-201 | ENST00000537570 | 439 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL389895.1-201 | ENST00000554127 | 252 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC123786.2-201 | ENST00000603459 | 275 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC103710.1-201 | ENST00000610003 | 901 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MIR6766-201 | ENST00000622641 | 72 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC097714.1-201 | ENST00000511272 | 1647 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| GLI3 | P10071 | FOXP2-211 | ENST00000408937 | 6443 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | ABCD2-201 | ENST00000308666 | 6238 nt | APPRIS P1 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | C9orf153-204 | ENST00000613665 | 1738 nt | APPRIS P2 TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | KLRC2-202 | ENST00000381902 | 1221 nt | APPRIS P2 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MIR7-2-201 | ENST00000384970 | 110 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | DIAPH2-AS1-202 | ENST00000445414 | 606 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | VN1R96P-201 | ENST00000446052 | 858 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LINC02430-201 | ENST00000504755 | 476 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC114316.1-201 | ENST00000511323 | 278 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | RRAS2-205 | ENST00000529237 | 1278 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | PPFIA2-AS1-202 | ENST00000549161 | 1080 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC025281.1-201 | ENST00000567026 | 265 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MIR3186-201 | ENST00000577404 | 85 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | MTND2P13-201 | ENST00000577438 | 1039 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| GLI3 | P10071 | PRRG1-202 | ENST00000449135 | 4481 nt | APPRIS P1 TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | Y_RNA.116-201 | ENST00000363292 | 103 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | RNU6-673P-201 | ENST00000365084 | 104 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | SNORD21-201 | ENST00000383953 | 95 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | Y_RNA.540-201 | ENST00000384638 | 111 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | SNORD88.1-201 | ENST00000408684 | 91 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | CYP3A43-205 | ENST00000415413 | 990 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL158834.2-201 | ENST00000415731 | 696 nt | TSL 2 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL390023.1-201 | ENST00000428836 | 262 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AP000936.1-201 | ENST00000442124 | 483 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | CYP3A43-210 | ENST00000444905 | 733 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | LINC00430-201 | ENST00000457672 | 597 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AC106791.1-201 | ENST00000514616 | 827 nt | TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AP003467.2-201 | ENST00000520175 | 319 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AP001109.1-201 | ENST00000587114 | 279 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL713998.2-201 | ENST00000604538 | 1198 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | C5orf63-207 | ENST00000606937 | 607 nt | TSL 2 BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | AL391813.2-201 | ENST00000609113 | 322 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| GLI3 | P10071 | C8orf89-201 | ENST00000613105 | 495 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |