Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC6P09630 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 AC099063.3-201ENST00000642066 185 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC6P09630 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC6P09630 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC6P09630 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC6P09630 NEAT1-202ENST00000501122 22743 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 AC119744.1-201ENST00000454746 1715 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC6P09630 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC6P09630 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 Y_RNA.18-201ENST00000362461 102 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 Y_RNA.41-201ENST00000362646 102 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 RNU6-1215P-201ENST00000384441 102 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 SNORD116-23-201ENST00000384645 92 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 AL590290.1-201ENST00000405336 380 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 RNA5SP104-201ENST00000410989 118 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC096664.2-201ENST00000411843 406 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 RPS15AP38-201ENST00000413110 372 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AL136133.1-201ENST00000413694 376 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 BOLA3P4-201ENST00000418151 400 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 BX842559.1-201ENST00000419615 532 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 Z99497.1-201ENST00000421282 135 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC005300.1-201ENST00000428401 373 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC087650.1-201ENST00000431445 468 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC092013.1-201ENST00000438795 332 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 CBX1P4-201ENST00000439415 457 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 COX6CP2-201ENST00000444980 225 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC073587.1-201ENST00000447093 876 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 EPS15P1-201ENST00000448836 336 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC6P09630 RPL23AP35-201ENST00000451906 501 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC005229.2-201ENST00000456995 399 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC010307.1-201ENST00000467206 836 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC139783.2-201ENST00000504847 1145 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC109458.1-201ENST00000508858 316 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC6P09630 RNU2-27P-201ENST00000516185 142 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 RNA5SP135-201ENST00000517019 125 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 IGKV2-36-201ENST00000519999 223 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC068446.3-201ENST00000555285 382 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 TRAV15-201ENST00000556680 249 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC008507.1-201ENST00000587506 734 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC079089.3-201ENST00000603094 673 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC083899.3-201ENST00000603413 594 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AC010200.2-201ENST00000605098 235 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC106028.5-201ENST00000610332 395 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC233309.1-201ENST00000619522 751 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 MIR8057-201ENST00000620957 69 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 AC127502.3-201ENST00000636170 1206 ntBASIC4.13□□□□□ -1.75
HOXC6P09630 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC6P09630 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC6P09630 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC6P09630 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC6P09630 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC6P09630 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC6P09630 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC6P09630 AC068254.2-201ENST00000623938 3577 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC6P09630 AC011155.1-201ENST00000316512 456 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXC6P09630 RNU6-1119P-201ENST00000384349 108 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC6P09630 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC6P09630 ELOCP17-201ENST00000414751 326 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 CDK8P2-201ENST00000415020 547 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.12□□□□□ -1.75
HOXC6P09630 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC6P09630 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms