Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MLLT10P2-201ENST00000506434 249 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AP001804.3-201ENST00000525146 880 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 AC018630.1-201ENST00000541376 925 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC125611.2-201ENST00000551907 647 ntBASIC3.11□□□□□ -1.91
TPM1P09493 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 AL355836.1-201ENST00000555951 870 ntBASIC3.11□□□□□ -1.91
TPM1P09493 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM1P09493 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM1P09493 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM1P09493 AL356575.1-201ENST00000603008 283 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC079880.2-201ENST00000603790 1213 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC021851.1-201ENST00000608537 1082 ntBASIC3.11□□□□□ -1.91
TPM1P09493 BX323046.1-201ENST00000610145 535 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC008083.4-201ENST00000615076 444 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AL355493.4-201ENST00000618530 292 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC007275.1-201ENST00000621243 671 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TPM1P09493 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM1P09493 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TPM1P09493 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM1P09493 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM1P09493 RNU1-109P-201ENST00000383960 147 ntBASIC3.1□□□□□ -1.91
TPM1P09493 RNU6-1074P-201ENST00000383995 104 ntBASIC3.1□□□□□ -1.91
TPM1P09493 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
TPM1P09493 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.1□□□□□ -1.91
TPM1P09493 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TPM1P09493 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM1P09493 AC092638.1-201ENST00000411966 1275 ntBASIC3.1□□□□□ -1.91
TPM1P09493 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.1□□□□□ -1.91
TPM1P09493 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.1□□□□□ -1.91
TPM1P09493 ZNF965P-201ENST00000432501 817 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM1P09493 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM1P09493 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AL359073.1-201ENST00000448036 403 ntBASIC3.1□□□□□ -1.91
TPM1P09493 HMGN3P1-201ENST00000453847 193 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM1P09493 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.1□□□□□ -1.91
TPM1P09493 RPS4XP6-201ENST00000477670 797 ntBASIC3.1□□□□□ -1.91
TPM1P09493 TBCAP3-201ENST00000512475 312 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM1P09493 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.1□□□□□ -1.91
TPM1P09493 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM1P09493 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM1P09493 AC004217.3-201ENST00000551552 878 ntBASIC3.1□□□□□ -1.91
TPM1P09493 NBEAP1-201ENST00000554452 979 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AP005205.1-201ENST00000563503 508 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM1P09493 GLUD1P4-201ENST00000590914 418 ntBASIC3.1□□□□□ -1.91
TPM1P09493 BNIP3P11-201ENST00000603878 563 ntBASIC3.1□□□□□ -1.91
TPM1P09493 AL133507.1-201ENST00000605269 557 ntBASIC3.1□□□□□ -1.91
TPM1P09493 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TPM1P09493 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TPM1P09493 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TPM1P09493 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC025750.1-201ENST00000399891 379 ntBASIC3.09□□□□□ -1.91
TPM1P09493 GSTA8P-201ENST00000404253 637 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC073310.1-201ENST00000423226 1033 ntBASIC3.09□□□□□ -1.91
TPM1P09493 RPS6P14-201ENST00000425165 719 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AL513043.1-201ENST00000439124 535 ntBASIC3.09□□□□□ -1.91
TPM1P09493 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM1P09493 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
TPM1P09493 ST13P20-201ENST00000447996 1065 ntBASIC3.09□□□□□ -1.91
TPM1P09493 BX248409.1-201ENST00000455497 255 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC034236.1-201ENST00000469891 373 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC104108.1-201ENST00000509930 412 ntBASIC3.09□□□□□ -1.91
TPM1P09493 PRELID3BP4-201ENST00000515476 571 ntBASIC3.09□□□□□ -1.91
TPM1P09493 DUXAP2-201ENST00000519198 589 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.09□□□□□ -1.91
TPM1P09493 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TPM1P09493 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM1P09493 AC053481.3-201ENST00000577881 843 ntBASIC3.09□□□□□ -1.91
TPM1P09493 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM1P09493 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM1P09493 ELOCP35-201ENST00000604289 336 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC106900.2-201ENST00000604994 317 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC006329.2-201ENST00000611491 394 ntBASIC3.09□□□□□ -1.91
TPM1P09493 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM1P09493 AC015967.1-201ENST00000619893 476 ntBASIC3.09□□□□□ -1.91
TPM1P09493 MIR6810-201ENST00000622701 70 ntBASIC3.09□□□□□ -1.91
TPM1P09493 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM1P09493 AC092593.1-201ENST00000515413 1815 ntBASIC3.09□□□□□ -1.92
TPM1P09493 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TPM1P09493 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
TPM1P09493 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM1P09493 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TPM1P09493 RNA5SP27-201ENST00000363839 119 ntBASIC3.08□□□□□ -1.92
TPM1P09493 SNORD115-48-201ENST00000364764 76 ntBASIC3.08□□□□□ -1.92
TPM1P09493 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM1P09493 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms