Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.98□□□□□ -1.77
RB1P06400 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.98□□□□□ -1.77
RB1P06400 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.97□□□□□ -1.77
RB1P06400 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.97□□□□□ -1.77
RB1P06400 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
RB1P06400 USP8P1-201ENST00000494673 3183 ntBASIC3.97□□□□□ -1.77
RB1P06400 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 RNU1-33P-201ENST00000364249 162 ntBASIC3.97□□□□□ -1.77
RB1P06400 RNU6-335P-201ENST00000364563 113 ntBASIC3.97□□□□□ -1.77
RB1P06400 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
RB1P06400 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 AL583834.1-201ENST00000406943 343 ntBASIC3.97□□□□□ -1.77
RB1P06400 RNU2-15P-201ENST00000410692 191 ntBASIC3.97□□□□□ -1.77
RB1P06400 RNA5SP120-201ENST00000410900 112 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC096664.2-201ENST00000411843 406 ntBASIC3.97□□□□□ -1.77
RB1P06400 BX842559.1-201ENST00000419615 532 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 ARPC3P5-201ENST00000448802 534 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC006480.1-201ENST00000449887 378 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC005297.2-201ENST00000450430 606 ntBASIC3.97□□□□□ -1.77
RB1P06400 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.97□□□□□ -1.77
RB1P06400 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.97□□□□□ -1.77
RB1P06400 AL445669.2-201ENST00000454425 421 ntBASIC3.97□□□□□ -1.77
RB1P06400 ANP32BP2-201ENST00000454525 545 ntBASIC3.97□□□□□ -1.77
RB1P06400 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 SUMO2P2-201ENST00000456482 255 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC078918.1-201ENST00000498515 228 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC093281.2-201ENST00000510153 597 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC010625.1-201ENST00000511296 403 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.97□□□□□ -1.77
RB1P06400 EEF1B2P4-201ENST00000551398 348 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 DUXAP6-201ENST00000553858 601 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
RB1P06400 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.97□□□□□ -1.77
RB1P06400 AC004009.2-201ENST00000623016 728 ntBASIC3.97□□□□□ -1.77
RB1P06400 AC005858.4-201ENST00000623191 700 ntBASIC3.97□□□□□ -1.77
RB1P06400 AL773545.4-201ENST00000637262 310 ntBASIC3.97□□□□□ -1.77
RB1P06400 AL513478.4-201ENST00000641636 310 ntBASIC3.97□□□□□ -1.77
RB1P06400 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RB1P06400 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.97□□□□□ -1.77
RB1P06400 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.97□□□□□ -1.77
RB1P06400 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RB1P06400 AC104454.1-201ENST00000421341 1401 ntBASIC3.96□□□□□ -1.77
RB1P06400 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RB1P06400 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 RPL23AP57-201ENST00000332361 466 ntBASIC3.96□□□□□ -1.78
RB1P06400 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
RB1P06400 RNA5SP258-201ENST00000362750 119 ntBASIC3.96□□□□□ -1.78
RB1P06400 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
RB1P06400 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RB1P06400 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 RNA5SP39-201ENST00000411245 120 ntBASIC3.96□□□□□ -1.78
RB1P06400 AMD1P2-201ENST00000412936 992 ntBASIC3.96□□□□□ -1.78
RB1P06400 AIMP1P1-201ENST00000418670 937 ntBASIC3.96□□□□□ -1.78
RB1P06400 AL008629.1-201ENST00000438615 184 ntBASIC3.96□□□□□ -1.78
RB1P06400 RNU7-136P-201ENST00000458819 69 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC004263.1-201ENST00000479327 332 ntBASIC3.96□□□□□ -1.78
RB1P06400 AP000563.1-201ENST00000490865 758 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.96□□□□□ -1.78
RB1P06400 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.96□□□□□ -1.78
RB1P06400 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RB1P06400 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.96□□□□□ -1.78
RB1P06400 AP003461.1-201ENST00000528866 78 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC092851.1-201ENST00000535964 478 ntBASIC3.96□□□□□ -1.78
RB1P06400 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.96□□□□□ -1.78
RB1P06400 AC107016.1-201ENST00000550463 337 ntBASIC3.96□□□□□ -1.78
RB1P06400 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.96□□□□□ -1.78
RB1P06400 GNRHR2P1-201ENST00000555315 631 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.96□□□□□ -1.78
RB1P06400 AC009101.1-201ENST00000568135 242 ntBASIC3.96□□□□□ -1.78
RB1P06400 MIR5186-201ENST00000577504 120 ntBASIC3.96□□□□□ -1.78
RB1P06400 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.96□□□□□ -1.78
RB1P06400 AC010928.3-201ENST00000587712 541 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC006116.10-201ENST00000591836 581 ntBASIC3.96□□□□□ -1.78
RB1P06400 SNRPGP15-201ENST00000600149 222 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.96□□□□□ -1.78
RB1P06400 AC091925.2-201ENST00000625059 256 ntBASIC3.96□□□□□ -1.78
RB1P06400 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.96□□□□□ -1.78
RB1P06400 DDX43P2-201ENST00000604753 1354 ntBASIC3.96□□□□□ -1.78
RB1P06400 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.96□□□□□ -1.78
RB1P06400 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms