Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL1A1P02452 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.78□□□□□ -1.96
COL1A1P02452 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.78□□□□□ -1.96
COL1A1P02452 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL1A1P02452 Z99496.1-201ENST00000469424 1477 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL1A1P02452 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.77□□□□□ -1.97
COL1A1P02452 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC107081.1-201ENST00000414975 361 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.77□□□□□ -1.97
COL1A1P02452 RN7SKP282-201ENST00000516824 299 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AP003467.2-201ENST00000520175 319 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.77□□□□□ -1.97
COL1A1P02452 AL645944.1-201ENST00000603857 493 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 MIR6766-201ENST00000622641 72 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
COL1A1P02452 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL1A1P02452 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL1A1P02452 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.77□□□□□ -1.97
COL1A1P02452 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
COL1A1P02452 RNU6-328P-201ENST00000390887 106 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.77□□□□□ -1.97
COL1A1P02452 AC124916.1-201ENST00000444020 547 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC069277.2-201ENST00000454211 432 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 TVP23BP2-201ENST00000455082 615 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 CFTRP1-201ENST00000456646 183 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.77□□□□□ -1.97
COL1A1P02452 AP000873.1-201ENST00000463987 400 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC068587.2-201ENST00000478386 781 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.77□□□□□ -1.97
COL1A1P02452 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.77□□□□□ -1.97
COL1A1P02452 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.77□□□□□ -1.97
COL1A1P02452 AP001004.1-201ENST00000582468 324 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AL353997.5-201ENST00000618886 171 ntBASIC2.77□□□□□ -1.97
COL1A1P02452 AC022336.2-201ENST00000568966 2538 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
COL1A1P02452 RNA5SP167-201ENST00000365461 116 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 RPL31P52-201ENST00000407532 367 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 RPL30P3-201ENST00000424262 333 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 HMGB3P30-201ENST00000457863 606 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 AP002371.1-201ENST00000463604 433 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.76□□□□□ -1.97
COL1A1P02452 MTCYBP20-201ENST00000524239 1129 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL1A1P02452 AC025423.2-201ENST00000537570 439 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.76□□□□□ -1.97
COL1A1P02452 AC022884.3-201ENST00000579571 248 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL1A1P02452 TPMTP1-201ENST00000592307 737 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 AC034236.3-201ENST00000605999 461 ntBASIC2.76□□□□□ -1.97
COL1A1P02452 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.76□□□□□ -1.97
COL1A1P02452 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
COL1A1P02452 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.76□□□□□ -1.97
COL1A1P02452 AP001486.2-201ENST00000561652 5113 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
COL1A1P02452 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.75□□□□□ -1.97
COL1A1P02452 AL161781.1-201ENST00000354277 403 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 Y_RNA.269-201ENST00000364685 89 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
COL1A1P02452 AC009965.2-201ENST00000425328 970 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 AL009174.1-201ENST00000426577 416 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 SNORD108-201ENST00000459332 71 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.75□□□□□ -1.97
COL1A1P02452 XKRY-201ENST00000510392 1100 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 RN7SKP219-201ENST00000516825 296 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.75□□□□□ -1.97
COL1A1P02452 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.75□□□□□ -1.97
COL1A1P02452 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.75□□□□□ -1.97
COL1A1P02452 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
COL1A1P02452 AC092447.7-201ENST00000422212 1621 ntBASIC2.75□□□□□ -1.97
COL1A1P02452 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
COL1A1P02452 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
COL1A1P02452 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL1A1P02452 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.74□□□□□ -1.97
COL1A1P02452 GABPAP-201ENST00000419271 1356 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.74□□□□□ -1.97
COL1A1P02452 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.74□□□□□ -1.97
COL1A1P02452 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL1A1P02452 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 U8.8-201ENST00000365399 135 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 OR5H15-201ENST00000383696 930 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 RPS24P8-201ENST00000431490 402 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.74□□□□□ -1.97
COL1A1P02452 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL1A1P02452 SNX5P1-201ENST00000505757 1041 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.74□□□□□ -1.97
COL1A1P02452 MTND5P21-201ENST00000531961 522 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 AC012531.5-201ENST00000611375 151 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 AC145207.9-201ENST00000623802 325 ntBASIC2.74□□□□□ -1.97
COL1A1P02452 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
COL1A1P02452 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.74□□□□□ -1.97
COL1A1P02452 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.74□□□□□ -1.97
COL1A1P02452 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL1A1P02452 DCAF13P1-201ENST00000495256 1330 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms