Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MIR5007-201ENST00000583098 95 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 MTND5P29-201ENST00000458676 1807 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
POLR1AO95602 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1AO95602 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1AO95602 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1AO95602 AL034379.1-201ENST00000423216 253 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1AO95602 AC007677.1-201ENST00000445757 515 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 AC068339.2-201ENST00000534395 618 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 OR4K7P-201ENST00000580232 945 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1AO95602 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1AO95602 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1AO95602 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
POLR1AO95602 RAD23BP2-201ENST00000416003 1207 ntBASIC3.26□□□□□ -1.89
POLR1AO95602 RWDD4P2-201ENST00000426392 563 ntBASIC3.26□□□□□ -1.89
POLR1AO95602 RWDD4P1-201ENST00000488019 565 ntBASIC3.26□□□□□ -1.89
POLR1AO95602 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.26□□□□□ -1.89
POLR1AO95602 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
POLR1AO95602 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1AO95602 AC091152.2-201ENST00000591628 2569 ntBASIC3.25□□□□□ -1.89
POLR1AO95602 AL591416.1-201ENST00000404015 867 ntBASIC3.25□□□□□ -1.89
POLR1AO95602 AC091917.2-201ENST00000505002 744 ntBASIC3.25□□□□□ -1.89
POLR1AO95602 HSPE1P18-201ENST00000517602 280 ntBASIC3.25□□□□□ -1.89
POLR1AO95602 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1AO95602 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR1AO95602 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1AO95602 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.24□□□□□ -1.89
POLR1AO95602 AL009174.1-201ENST00000426577 416 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1AO95602 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1AO95602 TBCAP3-201ENST00000512475 312 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 MTND5P4-201ENST00000514978 288 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 OR4R2P-201ENST00000530815 597 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1AO95602 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR1AO95602 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1AO95602 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1AO95602 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
POLR1AO95602 AL139156.1-201ENST00000412785 841 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 AC087190.1-201ENST00000484462 480 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1AO95602 MAGOH2P-202ENST00000584384 429 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 AC103710.1-201ENST00000610003 901 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 MIR219B-201ENST00000637023 88 ntBASIC3.24□□□□□ -1.89
POLR1AO95602 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1AO95602 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
POLR1AO95602 MIR21-201ENST00000362134 72 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 RNU2-22P-201ENST00000411266 212 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR1AO95602 AC129850.1-201ENST00000436203 508 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 AL138787.1-202ENST00000437804 898 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1AO95602 AC128687.1-201ENST00000605304 619 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 AL359198.2-201ENST00000611836 194 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1AO95602 ZNF271P-202ENST00000465539 1970 ntBASIC3.23□□□□□ -1.89
POLR1AO95602 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
POLR1AO95602 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1AO95602 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1AO95602 RPS27P5-201ENST00000444247 244 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1AO95602 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.22□□□□□ -1.89
POLR1AO95602 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1AO95602 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1AO95602 MTND5P21-201ENST00000531961 522 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AP000787.2-201ENST00000604432 568 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AC017076.1-201ENST00000607613 578 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
POLR1AO95602 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1AO95602 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1AO95602 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1AO95602 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1AO95602 AL035551.1-201ENST00000446931 348 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1AO95602 RNU6-1053P-201ENST00000515930 101 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1AO95602 AC025281.1-201ENST00000567026 265 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1AO95602 AC009831.4-201ENST00000620744 325 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.22□□□□□ -1.89
POLR1AO95602 U6.98-201ENST00000637157 84 ntBASIC3.22□□□□□ -1.89
POLR1AO95602 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.89
POLR1AO95602 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1AO95602 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC072039.1-201ENST00000477611 581 ntBASIC3.21□□□□□ -1.9
POLR1AO95602 GTF2IP9-201ENST00000502460 301 ntBASIC3.21□□□□□ -1.9
POLR1AO95602 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1AO95602 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.21□□□□□ -1.9
POLR1AO95602 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.21□□□□□ -1.9
POLR1AO95602 AL356575.1-201ENST00000603008 283 ntBASIC3.21□□□□□ -1.9
POLR1AO95602 AC093673.2-201ENST00000609674 331 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms