Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN9O95484 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN9O95484 U3.29-201ENST00000391296 212 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC016769.3-201ENST00000396562 315 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC092447.6-201ENST00000414578 210 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN9O95484 RPF2P1-201ENST00000424137 906 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 Z93242.1-201ENST00000427102 353 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC092393.1-201ENST00000439625 742 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 MRPL42P4-201ENST00000453267 443 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC244505.3-201ENST00000454598 187 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 CAB39P1-201ENST00000502277 460 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC110794.1-201ENST00000505816 425 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC026427.2-201ENST00000506228 536 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 RNU6-27P-201ENST00000516146 107 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN9O95484 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN9O95484 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC122134.1-202ENST00000569111 1201 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN9O95484 AL390240.1-201ENST00000612950 384 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AL360181.4-201ENST00000621752 134 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 AC095031.1-201ENST00000623685 672 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 AC026634.1-201ENST00000634369 198 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN9O95484 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.08□□□□□ -1.92
CLDN9O95484 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN9O95484 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN9O95484 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 OR1S2-201ENST00000302592 978 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 RNU6-1074P-201ENST00000383995 104 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 TAF9BP1-201ENST00000396646 746 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 RPL7P27-201ENST00000403775 720 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 RNU2-28P-201ENST00000410457 189 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 Z92545.1-201ENST00000411782 234 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 BTF3P8-201ENST00000414577 526 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC063979.1-201ENST00000415539 377 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 RAC1P8-201ENST00000427086 527 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC012497.1-201ENST00000429392 575 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 MTND2P19-201ENST00000449129 1012 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC017015.1-201ENST00000477387 286 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC013828.1-201ENST00000481845 158 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC096751.1-202ENST00000502691 1067 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC093801.2-201ENST00000503966 1050 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC026414.1-201ENST00000504046 698 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC098799.1-201ENST00000504752 800 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC074250.1-201ENST00000511117 192 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 RNU1-61P-201ENST00000516107 151 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 RPL12P22-201ENST00000519073 490 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC087894.1-201ENST00000538359 518 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN9O95484 EEF1B2P4-201ENST00000551398 348 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 MTCYBP27-201ENST00000555160 670 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 MIR4513-201ENST00000581077 86 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.07□□□□□ -1.92
CLDN9O95484 SNORD84-203ENST00000584275 78 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 CKS1BP3-201ENST00000600888 237 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AL109653.1-201ENST00000603091 248 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC012669.1-201ENST00000603209 283 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AP001330.4-201ENST00000604350 154 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC099785.1-201ENST00000605697 437 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 AC096577.2-201ENST00000611455 153 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 AP000943.4-201ENST00000622912 357 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN9O95484 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN9O95484 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN9O95484 AL049780.3-201ENST00000624612 1583 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CLDN9O95484 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN9O95484 AC073346.2-201ENST00000624724 2058 ntBASIC3.07□□□□□ -1.92
CLDN9O95484 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN9O95484 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms