Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC067945.1-201ENST00000342609 618 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 RNU5F-7P-201ENST00000363696 115 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AF274854.1-201ENST00000413236 615 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 RPL17P12-201ENST00000413391 526 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 HMGB1P11-201ENST00000413899 637 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC004448.2-201ENST00000422360 586 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC096632.1-201ENST00000427395 310 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AL671855.1-201ENST00000446875 1203 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 ARL2BPP4-201ENST00000506854 471 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 IGHV3-32-201ENST00000519182 355 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 RANP9-201ENST00000519957 271 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC068587.4-201ENST00000533893 186 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC010546.1-201ENST00000569391 485 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 EIF1P4-201ENST00000572664 335 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC012065.4-201ENST00000602445 679 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC112187.2-201ENST00000604345 283 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AL021997.1-201ENST00000605757 193 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AL359535.1-201ENST00000612100 1087 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC005332.10-201ENST00000612725 619 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC006386.2-201ENST00000624491 75 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AC012005.1-201ENST00000624575 75 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 AL353743.1-202ENST00000431724 1695 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 Z95327.2-201ENST00000414579 1873 ntBASIC5.62□□□□□ -1.51
RAPGEF3O95398 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAPGEF3O95398 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAPGEF3O95398 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RAPGEF3O95398 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AL022322.2-201ENST00000624072 20397 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 RNU4-35P-201ENST00000362588 141 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 SNORA75-201ENST00000384158 137 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 Y_RNA.517-201ENST00000384551 106 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 RPS3AP9-201ENST00000417027 792 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 DBIP2-201ENST00000419076 262 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC000374.1-201ENST00000434698 1745 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 SNRPFP4-201ENST00000456366 242 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC010683.1-201ENST00000473673 378 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 TMED11P-201ENST00000479478 690 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 RN7SL504P-201ENST00000494496 287 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC018797.3-201ENST00000513388 1241 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 MTND1P5-201ENST00000517906 940 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 ZNF705CP-201ENST00000530515 889 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 LSM6P2-201ENST00000552208 177 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 HSPE1P3-201ENST00000559254 309 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 LARP7P3-201ENST00000579888 337 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 AC104662.1-201ENST00000604448 511 ntBASIC5.61□□□□□ -1.51
RAPGEF3O95398 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.61□□□□□ -1.51
RAPGEF3O95398 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAPGEF3O95398 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 ASNSP1-201ENST00000518311 1939 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC105074.1-201ENST00000623380 3095 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC007685.1-201ENST00000329806 452 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 RPL31P52-201ENST00000407532 367 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 VN1R8P-201ENST00000407739 893 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC245054.1-201ENST00000420944 258 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 RPS27AP14-201ENST00000422868 454 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 SNRPEP7-201ENST00000438350 220 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 EEF1E1P1-201ENST00000446998 430 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 MEMO1P3-201ENST00000459811 302 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC096576.1-201ENST00000489014 359 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 FTH1P24-201ENST00000503502 462 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC021678.1-201ENST00000505195 936 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC093809.1-201ENST00000509155 340 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 MTND5P4-201ENST00000514978 288 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 RNU6-405P-201ENST00000516637 110 ntBASIC5.6□□□□□ -1.51
RAPGEF3O95398 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.6□□□□□ -1.51
RAPGEF3O95398 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAPGEF3O95398 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms