Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 MIR148B-201ENST00000362252 99 ntBASIC1.01□□□□□ -2.25
USH2AO75445 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.01□□□□□ -2.25
USH2AO75445 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.01□□□□□ -2.25
USH2AO75445 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.01□□□□□ -2.25
USH2AO75445 AC021146.1-201ENST00000511202 716 ntBASIC1.01□□□□□ -2.25
USH2AO75445 RNA5SP380-201ENST00000517190 98 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC141257.3-201ENST00000572906 215 ntBASIC1.01□□□□□ -2.25
USH2AO75445 AC008568.2-201ENST00000623862 2313 ntBASIC1.01□□□□□ -2.25
USH2AO75445 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 RNU1-89P-201ENST00000384592 164 ntBASIC1.01□□□□□ -2.25
USH2AO75445 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.01□□□□□ -2.25
USH2AO75445 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 AL590399.6-201ENST00000446396 307 ntBASIC1.01□□□□□ -2.25
USH2AO75445 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.01□□□□□ -2.25
USH2AO75445 OR10D4P-201ENST00000525892 951 ntBASIC1.01□□□□□ -2.25
USH2AO75445 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 CU459211.1-201ENST00000635667 749 ntBASIC1.01□□□□□ -2.25
USH2AO75445 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.01□□□□□ -2.25
USH2AO75445 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
USH2AO75445 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.01□□□□□ -2.25
USH2AO75445 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 RNU1-91P-201ENST00000364746 163 ntBASIC1□□□□□ -2.25
USH2AO75445 Y_RNA.433-201ENST00000384089 102 ntBASIC1□□□□□ -2.25
USH2AO75445 SNORA11.4-201ENST00000408823 129 ntBASIC1□□□□□ -2.25
USH2AO75445 AC092155.2-201ENST00000454675 477 ntBASIC1□□□□□ -2.25
USH2AO75445 AC090543.1-201ENST00000492168 485 ntBASIC1□□□□□ -2.25
USH2AO75445 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 ARL2BPP6-201ENST00000512757 439 ntBASIC1□□□□□ -2.25
USH2AO75445 FABP5P12-201ENST00000515543 389 ntBASIC1□□□□□ -2.25
USH2AO75445 AC068657.1-201ENST00000520807 306 ntBASIC1□□□□□ -2.25
USH2AO75445 AC008507.1-201ENST00000587506 734 ntBASIC1□□□□□ -2.25
USH2AO75445 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
USH2AO75445 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
USH2AO75445 AC092326.2-201ENST00000624772 1561 ntBASIC1□□□□□ -2.25
USH2AO75445 U3.11-201ENST00000364476 212 ntBASIC1□□□□□ -2.25
USH2AO75445 VTRNA1-3-201ENST00000365645 89 ntBASIC1□□□□□ -2.25
USH2AO75445 SETP15-201ENST00000412724 337 ntBASIC1□□□□□ -2.25
USH2AO75445 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1□□□□□ -2.25
USH2AO75445 GTF2IP23-201ENST00000423746 351 ntBASIC1□□□□□ -2.25
USH2AO75445 AC092427.1-202ENST00000430569 476 ntBASIC1□□□□□ -2.25
USH2AO75445 RPL23AP45-201ENST00000476406 468 ntBASIC1□□□□□ -2.25
USH2AO75445 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1□□□□□ -2.25
USH2AO75445 TMEM248P1-201ENST00000510579 951 ntBASIC1□□□□□ -2.25
USH2AO75445 AP001804.3-201ENST00000525146 880 ntBASIC1□□□□□ -2.25
USH2AO75445 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 OR4P1P-201ENST00000530808 1136 ntBASIC1□□□□□ -2.25
USH2AO75445 RPL23AP84-201ENST00000571193 464 ntBASIC1□□□□□ -2.25
USH2AO75445 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1□□□□□ -2.25
USH2AO75445 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
USH2AO75445 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
USH2AO75445 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
USH2AO75445 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1□□□□□ -2.25
USH2AO75445 AC007342.7-201ENST00000624610 2337 ntBASIC1□□□□□ -2.25
USH2AO75445 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 RPS12P23-201ENST00000419579 400 ntBASIC1□□□□□ -2.25
USH2AO75445 RPL7P46-201ENST00000425129 740 ntBASIC1□□□□□ -2.25
USH2AO75445 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1□□□□□ -2.25
USH2AO75445 AC007536.1-201ENST00000533382 349 ntBASIC1□□□□□ -2.25
USH2AO75445 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1□□□□□ -2.25
USH2AO75445 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 Y_RNA.783-201ENST00000613546 102 ntBASIC1□□□□□ -2.25
USH2AO75445 AC091953.2-201ENST00000623979 160 ntBASIC1□□□□□ -2.25
USH2AO75445 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
USH2AO75445 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1□□□□□ -2.25
USH2AO75445 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 DNAJC19P6-201ENST00000401853 280 ntBASIC1□□□□□ -2.25
USH2AO75445 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1□□□□□ -2.25
USH2AO75445 AC009237.8-201ENST00000445492 379 ntBASIC1□□□□□ -2.25
USH2AO75445 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1□□□□□ -2.25
USH2AO75445 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1□□□□□ -2.25
USH2AO75445 OR4R2P-201ENST00000530815 597 ntBASIC1□□□□□ -2.25
USH2AO75445 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
USH2AO75445 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1□□□□□ -2.25
USH2AO75445 LRRC37A5P-203ENST00000580181 585 ntBASIC1□□□□□ -2.25
USH2AO75445 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
USH2AO75445 SNORA70.7-201ENST00000384159 133 ntBASIC0.99□□□□□ -2.25
USH2AO75445 MIR181B1-201ENST00000385240 110 ntBASIC0.99□□□□□ -2.25
USH2AO75445 AL121834.1-202ENST00000404494 277 ntBASIC0.99□□□□□ -2.25
USH2AO75445 MTCYBP31-201ENST00000438855 1122 ntBASIC0.99□□□□□ -2.25
USH2AO75445 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.99□□□□□ -2.25
USH2AO75445 AC022795.1-201ENST00000473808 480 ntBASIC0.99□□□□□ -2.25
USH2AO75445 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC0.99□□□□□ -2.25
USH2AO75445 RNA5SP182-201ENST00000516064 82 ntBASIC0.99□□□□□ -2.25
USH2AO75445 IGHV3-63-201ENST00000518422 341 ntBASIC0.99□□□□□ -2.25
USH2AO75445 AC068339.2-201ENST00000534395 618 ntBASIC0.99□□□□□ -2.25
USH2AO75445 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms