Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RPL36AP41-201ENST00000493820 306 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 OR5H5P-201ENST00000503164 928 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC019235.1-201ENST00000503847 207 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 MTCO1P35-201ENST00000515270 228 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 NRON-201ENST00000517270 370 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC022616.6-201ENST00000520479 119 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 RPS3AP4-201ENST00000555161 764 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4BO75351 AC069061.3-201ENST00000582254 823 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC011477.5-201ENST00000586571 259 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC093227.2-201ENST00000589357 285 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 BPIFA4P-203ENST00000603168 689 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC011468.4-201ENST00000603942 409 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS4BO75351 U6.42-201ENST00000618440 107 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC034229.5-201ENST00000624258 185 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC068880.5-201ENST00000624331 290 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC011944.2-201ENST00000624440 683 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC008785.1-201ENST00000624475 456 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 AC244258.1-201ENST00000637553 1071 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 MTND5P33-201ENST00000571250 1450 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4BO75351 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.41□□□□□ -1.7
VPS4BO75351 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS4BO75351 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS4BO75351 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS4BO75351 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.7
VPS4BO75351 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS4BO75351 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
VPS4BO75351 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS4BO75351 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS4BO75351 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS4BO75351 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS4BO75351 RNA5SP258-201ENST00000362750 119 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 Y_RNA.234-201ENST00000364409 97 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RNY4P34-201ENST00000364779 95 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 Y_RNA.296-201ENST00000364930 108 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 SNORD82-201ENST00000365530 70 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RNU1-63P-201ENST00000383902 164 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RNY3P14-201ENST00000384309 102 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS4BO75351 MTCO3P40-201ENST00000392516 676 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RPS3AP36-201ENST00000398190 775 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 BX295541.1-201ENST00000417774 250 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 USP9YP36-201ENST00000424581 829 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC127537.2-201ENST00000439258 465 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AL353572.1-201ENST00000442490 417 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4BO75351 AP1S2P1-201ENST00000457344 379 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 RBM43P1-201ENST00000476891 1081 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC022790.1-201ENST00000522872 204 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS4BO75351 AC008782.1-201ENST00000603386 430 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC245014.2-201ENST00000603689 287 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC010201.1-201ENST00000605051 540 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC246785.4-201ENST00000605374 287 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4BO75351 BX664608.1-201ENST00000610519 487 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 AC110994.2-201ENST00000635481 492 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4BO75351 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS4BO75351 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4BO75351 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS4BO75351 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS4BO75351 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4BO75351 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS4BO75351 AL359893.1-201ENST00000447628 1580 ntBASIC4.4□□□□□ -1.71
VPS4BO75351 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 AC008033.1-201ENST00000216407 1162 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 AL359837.1-201ENST00000381357 287 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 300.5 ms