Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC061975.8-201ENST00000587058 721 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC068790.6-201ENST00000602558 258 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 PSMA6P4-201ENST00000603247 718 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 DPRXP5-201ENST00000604662 539 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AL137843.1-201ENST00000605078 385 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC139769.3-201ENST00000618383 175 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CACNA1FO60840 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 RNU6-236P-201ENST00000363886 106 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 U6.112-201ENST00000384129 70 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 RNU5A-2P-201ENST00000384337 116 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 MTCO1P56-201ENST00000401674 224 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 ELOCP9-201ENST00000418624 239 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 IPMKP1-201ENST00000425988 855 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 USP9YP14-201ENST00000430663 563 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 MTCYBP12-201ENST00000440559 1134 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.74□□□□□ -1.81
CACNA1FO60840 CASP3P1-201ENST00000446037 609 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.74□□□□□ -1.81
CACNA1FO60840 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC027807.1-201ENST00000559921 996 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC012254.4-201ENST00000588843 273 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC007566.2-201ENST00000603642 413 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC010200.2-201ENST00000605098 235 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC067852.7-201ENST00000623270 535 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC098679.5-201ENST00000624394 571 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CACNA1FO60840 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CACNA1FO60840 AC093010.3-201ENST00000570269 15214 ntBASIC3.74□□□□□ -1.81
CACNA1FO60840 AC093831.2-201ENST00000624393 3427 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 RNU6-636P-201ENST00000384598 107 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 MIR9-1-201ENST00000385198 89 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 RNU6-192P-201ENST00000391253 100 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AL590084.1-201ENST00000407885 387 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC092638.1-201ENST00000411966 1275 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 RPS29P6-201ENST00000438196 145 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 MTND1P34-201ENST00000438556 671 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 MTND2P4-201ENST00000445034 1004 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AL157827.1-201ENST00000447622 132 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 UQCRHP3-201ENST00000451503 251 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 CALM1P2-201ENST00000452941 448 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AC023050.1-201ENST00000498198 304 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC025459.1-201ENST00000504072 156 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AC118282.2-201ENST00000508739 374 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AC034159.1-201ENST00000513885 583 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 AL583856.2-201ENST00000606298 543 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.73□□□□□ -1.81
CACNA1FO60840 MFSD8-245ENST00000641743 948 ntBASIC3.73□□□□□ -1.81
CACNA1FO60840 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 RNU4-68P-201ENST00000364314 141 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CACNA1FO60840 BTF3P8-201ENST00000414577 526 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC234781.2-201ENST00000426370 994 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RPL23AP4-201ENST00000427757 463 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AL445567.1-201ENST00000439121 144 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 PTGES3P1-201ENST00000439531 483 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AL592437.1-201ENST00000443781 492 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 HMGB1P48-201ENST00000446155 598 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 MTND5P13-201ENST00000513046 1079 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RN7SKP132-201ENST00000516001 208 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RNU5A-4P-201ENST00000516588 111 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 RN7SKP289-201ENST00000517244 295 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 MTCO3P15-201ENST00000526563 574 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AP003033.1-201ENST00000527244 415 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.72□□□□□ -1.81
CACNA1FO60840 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AL354943.1-201ENST00000572103 781 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
CACNA1FO60840 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.72□□□□□ -1.81
CACNA1FO60840 TUSC7.1-201ENST00000610969 165 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 AC091931.1-201ENST00000623488 728 ntBASIC3.72□□□□□ -1.81
CACNA1FO60840 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms