Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC006390.1-201ENST00000508068 283 ntBASIC3.65□□□□□ -1.83
TO15178 MTND5P4-201ENST00000514978 288 ntBASIC3.65□□□□□ -1.83
TO15178 RNA5SP179-201ENST00000517284 121 ntBASIC3.65□□□□□ -1.83
TO15178 AC087369.1-201ENST00000520775 996 ntBASIC3.65□□□□□ -1.83
TO15178 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.65□□□□□ -1.83
TO15178 COX6CP8-201ENST00000522620 226 ntBASIC3.65□□□□□ -1.83
TO15178 HIGD1AP10-201ENST00000527837 282 ntBASIC3.65□□□□□ -1.83
TO15178 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 OR8R1P-201ENST00000543943 764 ntBASIC3.65□□□□□ -1.83
TO15178 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 AC012182.1-201ENST00000570133 895 ntBASIC3.65□□□□□ -1.83
TO15178 MIR3160-1-201ENST00000577972 85 ntBASIC3.65□□□□□ -1.83
TO15178 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.65□□□□□ -1.83
TO15178 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 AL163642.2-201ENST00000604722 1019 ntBASIC3.65□□□□□ -1.83
TO15178 AC091167.4-201ENST00000605079 184 ntBASIC3.65□□□□□ -1.83
TO15178 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
TO15178 AC072039.2-201ENST00000608883 439 ntBASIC3.65□□□□□ -1.83
TO15178 AL590282.1-201ENST00000610379 1136 ntBASIC3.65□□□□□ -1.83
TO15178 AC068831.8-201ENST00000620171 435 ntBASIC3.65□□□□□ -1.83
TO15178 PCMTD1P7-201ENST00000634506 357 ntBASIC3.65□□□□□ -1.83
TO15178 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TO15178 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TO15178 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TO15178 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.65□□□□□ -1.83
TO15178 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
TO15178 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
TO15178 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.64□□□□□ -1.83
TO15178 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
TO15178 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 MIR320C1-201ENST00000408566 88 ntBASIC3.64□□□□□ -1.83
TO15178 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.64□□□□□ -1.83
TO15178 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.64□□□□□ -1.83
TO15178 EZH2P1-201ENST00000431167 291 ntBASIC3.64□□□□□ -1.83
TO15178 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
TO15178 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.64□□□□□ -1.83
TO15178 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 AC104563.1-201ENST00000476147 376 ntBASIC3.64□□□□□ -1.83
TO15178 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.64□□□□□ -1.83
TO15178 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.64□□□□□ -1.83
TO15178 COX7A2P2-201ENST00000505291 250 ntBASIC3.64□□□□□ -1.83
TO15178 AC093809.1-201ENST00000509155 340 ntBASIC3.64□□□□□ -1.83
TO15178 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.64□□□□□ -1.83
TO15178 AC010486.3-201ENST00000511602 785 ntBASIC3.64□□□□□ -1.83
TO15178 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
TO15178 MTCO2P32-201ENST00000514865 403 ntBASIC3.64□□□□□ -1.83
TO15178 AC087276.1-201ENST00000529659 480 ntBASIC3.64□□□□□ -1.83
TO15178 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.64□□□□□ -1.83
TO15178 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TO15178 OR6C7P-201ENST00000547875 934 ntBASIC3.64□□□□□ -1.83
TO15178 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.64□□□□□ -1.83
TO15178 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.64□□□□□ -1.83
TO15178 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.64□□□□□ -1.83
TO15178 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.64□□□□□ -1.83
TO15178 Z99497.2-201ENST00000603634 310 ntBASIC3.64□□□□□ -1.83
TO15178 AC090186.1-201ENST00000605991 572 ntBASIC3.64□□□□□ -1.83
TO15178 MIR6500-201ENST00000622700 86 ntBASIC3.64□□□□□ -1.83
TO15178 AC068724.3-201ENST00000625906 87 ntBASIC3.64□□□□□ -1.83
TO15178 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TO15178 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
TO15178 AP002001.2-201ENST00000529025 1469 ntBASIC3.64□□□□□ -1.83
TO15178 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TO15178 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.64□□□□□ -1.83
TO15178 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TO15178 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.64□□□□□ -1.83
TO15178 AC116096.1-201ENST00000566804 2314 ntBASIC3.64□□□□□ -1.83
TO15178 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TO15178 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TO15178 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TO15178 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TO15178 RNU6-500P-201ENST00000362349 107 ntBASIC3.63□□□□□ -1.83
TO15178 RNA5SP258-201ENST00000362750 119 ntBASIC3.63□□□□□ -1.83
TO15178 RNU6-433P-201ENST00000363216 104 ntBASIC3.63□□□□□ -1.83
TO15178 RNA5SP283-201ENST00000365604 119 ntBASIC3.63□□□□□ -1.83
TO15178 RNU6-213P-201ENST00000384051 104 ntBASIC3.63□□□□□ -1.83
TO15178 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.63□□□□□ -1.83
TO15178 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.63□□□□□ -1.83
TO15178 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.63□□□□□ -1.83
TO15178 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.63□□□□□ -1.83
TO15178 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
TO15178 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.63□□□□□ -1.83
TO15178 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.63□□□□□ -1.83
TO15178 ATP5HP2-201ENST00000433885 485 ntBASIC3.63□□□□□ -1.83
TO15178 AC096638.2-201ENST00000434965 711 ntBASIC3.63□□□□□ -1.83
TO15178 SETP5-201ENST00000437270 562 ntBASIC3.63□□□□□ -1.83
TO15178 AL445567.1-201ENST00000439121 144 ntBASIC3.63□□□□□ -1.83
TO15178 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.63□□□□□ -1.83
TO15178 Z95327.1-201ENST00000446082 482 ntBASIC3.63□□□□□ -1.83
TO15178 AC002381.1-201ENST00000447049 280 ntBASIC3.63□□□□□ -1.83
TO15178 RPL7P52-201ENST00000449200 742 ntBASIC3.63□□□□□ -1.83
TO15178 OR6C5P-201ENST00000452388 923 ntBASIC3.63□□□□□ -1.83
TO15178 AL136097.1-201ENST00000456945 913 ntBASIC3.63□□□□□ -1.83
TO15178 RPL21P11-201ENST00000461458 483 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms