Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC026523.2-201ENST00000625039 7739 ntBASIC4.38□□□□□ -1.71
CUX2O14529 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CUX2O14529 MTND5P19-201ENST00000424872 1794 ntBASIC4.38□□□□□ -1.71
CUX2O14529 RNU6-317P-201ENST00000384031 107 ntBASIC4.37□□□□□ -1.71
CUX2O14529 RNU6-40P-201ENST00000384254 107 ntBASIC4.37□□□□□ -1.71
CUX2O14529 CCNB2P1-201ENST00000399411 1150 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AL359511.1-201ENST00000402970 211 ntBASIC4.37□□□□□ -1.71
CUX2O14529 YPEL5P1-201ENST00000419731 367 ntBASIC4.37□□□□□ -1.71
CUX2O14529 MTND4LP14-201ENST00000429447 288 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.37□□□□□ -1.71
CUX2O14529 VDAC1P3-201ENST00000434069 851 ntBASIC4.37□□□□□ -1.71
CUX2O14529 ZFAND6P1-201ENST00000434138 605 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.37□□□□□ -1.71
CUX2O14529 MTND6P18-201ENST00000439477 513 ntBASIC4.37□□□□□ -1.71
CUX2O14529 MTND5P8-201ENST00000449817 1083 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AP004217.1-201ENST00000480579 346 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.37□□□□□ -1.71
CUX2O14529 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CUX2O14529 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CUX2O14529 RNU6-295P-201ENST00000516901 104 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AL355802.4-201ENST00000607635 548 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.37□□□□□ -1.71
CUX2O14529 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.37□□□□□ -1.71
CUX2O14529 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.37□□□□□ -1.71
CUX2O14529 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.37□□□□□ -1.71
CUX2O14529 SNORD115-48-201ENST00000364764 76 ntBASIC4.37□□□□□ -1.71
CUX2O14529 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CUX2O14529 MIR92A2-201ENST00000385299 75 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AL159169.1-201ENST00000421119 127 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AL133271.1-201ENST00000538229 291 ntBASIC4.37□□□□□ -1.71
CUX2O14529 NOP56P3-201ENST00000549457 385 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.37□□□□□ -1.71
CUX2O14529 AL450489.1-201ENST00000612071 468 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AC139769.3-201ENST00000618383 175 ntBASIC4.37□□□□□ -1.71
CUX2O14529 MFSD8-245ENST00000641743 948 ntBASIC4.37□□□□□ -1.71
CUX2O14529 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CUX2O14529 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CUX2O14529 AC093010.3-201ENST00000570269 15214 ntBASIC4.36□□□□□ -1.71
CUX2O14529 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CUX2O14529 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CUX2O14529 MIR181B1-201ENST00000385240 110 ntBASIC4.36□□□□□ -1.71
CUX2O14529 RPLP0P7-201ENST00000416050 667 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AC073464.3-201ENST00000422564 712 ntBASIC4.36□□□□□ -1.71
CUX2O14529 ZNF965P-201ENST00000432501 817 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AL353597.2-202ENST00000434901 373 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AL513343.1-201ENST00000451818 792 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AC010627.1-201ENST00000503819 1294 ntBASIC4.36□□□□□ -1.71
CUX2O14529 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.36□□□□□ -1.71
CUX2O14529 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.36□□□□□ -1.71
CUX2O14529 MIR4635-201ENST00000583759 79 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AC008277.2-201ENST00000605196 797 ntBASIC4.36□□□□□ -1.71
CUX2O14529 AC128687.1-201ENST00000605304 619 ntBASIC4.36□□□□□ -1.71
CUX2O14529 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CUX2O14529 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.36□□□□□ -1.71
CUX2O14529 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CUX2O14529 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CUX2O14529 RNU6-185P-201ENST00000384421 107 ntBASIC4.35□□□□□ -1.71
CUX2O14529 HSPD1P16-201ENST00000402302 394 ntBASIC4.35□□□□□ -1.71
CUX2O14529 AC009965.2-201ENST00000425328 970 ntBASIC4.35□□□□□ -1.71
CUX2O14529 FO393419.3-201ENST00000428741 282 ntBASIC4.35□□□□□ -1.71
CUX2O14529 RPS26P30-201ENST00000443431 335 ntBASIC4.35□□□□□ -1.71
CUX2O14529 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.35□□□□□ -1.71
CUX2O14529 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.35□□□□□ -1.71
CUX2O14529 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.35□□□□□ -1.71
CUX2O14529 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.35□□□□□ -1.71
CUX2O14529 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.35□□□□□ -1.71
CUX2O14529 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CUX2O14529 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CUX2O14529 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
CUX2O14529 AC010329.2-201ENST00000595195 2737 ntBASIC4.34□□□□□ -1.71
CUX2O14529 AL589826.1-201ENST00000340697 249 ntBASIC4.34□□□□□ -1.71
CUX2O14529 RNU6-452P-201ENST00000384406 107 ntBASIC4.34□□□□□ -1.71
CUX2O14529 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CUX2O14529 AL451074.5-201ENST00000415894 435 ntBASIC4.34□□□□□ -1.71
CUX2O14529 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.34□□□□□ -1.71
CUX2O14529 AL031663.1-201ENST00000437445 219 ntBASIC4.34□□□□□ -1.71
CUX2O14529 TPRKBP1-201ENST00000456243 481 ntBASIC4.34□□□□□ -1.71
CUX2O14529 AC005912.1-201ENST00000495392 255 ntBASIC4.34□□□□□ -1.71
CUX2O14529 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.34□□□□□ -1.71
CUX2O14529 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.34□□□□□ -1.71
CUX2O14529 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.34□□□□□ -1.71
CUX2O14529 AC104307.1-201ENST00000616142 196 ntBASIC4.34□□□□□ -1.71
CUX2O14529 OR1S1-201ENST00000624470 978 ntBASIC4.34□□□□□ -1.71
CUX2O14529 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CUX2O14529 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CUX2O14529 MTND5P6-201ENST00000422338 1798 ntBASIC4.33□□□□□ -1.72
CUX2O14529 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CUX2O14529 GTF2H2B-203ENST00000508065 1432 ntBASIC4.33□□□□□ -1.72
CUX2O14529 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.33□□□□□ -1.72
CUX2O14529 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CUX2O14529 MIR142-201ENST00000384835 87 ntBASIC4.33□□□□□ -1.72
CUX2O14529 SNORA17.3-201ENST00000391159 129 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC013404.1-201ENST00000413068 249 ntBASIC4.33□□□□□ -1.72
CUX2O14529 MTND2P3-201ENST00000452458 470 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CUX2O14529 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.33□□□□□ -1.72
CUX2O14529 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.33□□□□□ -1.72
CUX2O14529 AC026464.5-201ENST00000562497 722 ntBASIC4.33□□□□□ -1.72
CUX2O14529 VN1R84P-201ENST00000593697 235 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC010620.2-201ENST00000600135 313 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms