Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-1032P-201ENST00000384100 107 ntBASIC5.52□□□□□ -1.53
SOX1O00570 SSXP10-201ENST00000402595 565 ntBASIC5.52□□□□□ -1.53
SOX1O00570 RNA5SP251-201ENST00000410614 137 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC009302.1-201ENST00000417147 390 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 AC016027.5-201ENST00000427227 210 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC093414.1-201ENST00000434712 514 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC005154.2-201ENST00000438110 379 ntBASIC5.52□□□□□ -1.53
SOX1O00570 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 AC011276.1-201ENST00000469688 323 ntBASIC5.52□□□□□ -1.53
SOX1O00570 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-764P-201ENST00000516396 105 ntBASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-256P-201ENST00000516747 97 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC023632.4-201ENST00000517783 191 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL137161.1-201ENST00000532231 390 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 AL161670.1-201ENST00000554348 137 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.52□□□□□ -1.53
SOX1O00570 MIR3672-201ENST00000584290 82 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX1O00570 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX1O00570 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.52□□□□□ -1.53
SOX1O00570 PSMA6P4-201ENST00000603247 718 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL670379.11-201ENST00000604059 253 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL670379.10-201ENST00000604330 253 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL670379.12-201ENST00000605291 253 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AL670379.9-201ENST00000605428 253 ntBASIC5.52□□□□□ -1.53
SOX1O00570 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC011155.2-201ENST00000623202 216 ntBASIC5.52□□□□□ -1.53
SOX1O00570 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SOX1O00570 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX1O00570 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 AL049641.1-201ENST00000441055 1948 ntBASIC5.52□□□□□ -1.53
SOX1O00570 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.52□□□□□ -1.53
SOX1O00570 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SOX1O00570 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 AL590240.1-201ENST00000334118 313 ntBASIC5.51□□□□□ -1.53
SOX1O00570 Y_RNA.47-201ENST00000362697 108 ntBASIC5.51□□□□□ -1.53
SOX1O00570 RNU6-179P-201ENST00000363350 107 ntBASIC5.51□□□□□ -1.53
SOX1O00570 Y_RNA.188-201ENST00000363952 111 ntBASIC5.51□□□□□ -1.53
SOX1O00570 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 VDAC1P9-201ENST00000412766 841 ntBASIC5.51□□□□□ -1.53
SOX1O00570 BX323014.1-201ENST00000412876 237 ntBASIC5.51□□□□□ -1.53
SOX1O00570 CYCSP10-201ENST00000417973 294 ntBASIC5.51□□□□□ -1.53
SOX1O00570 AC018865.2-201ENST00000423631 129 ntBASIC5.51□□□□□ -1.53
SOX1O00570 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX1O00570 AC022431.1-201ENST00000450941 438 ntBASIC5.51□□□□□ -1.53
SOX1O00570 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.51□□□□□ -1.53
SOX1O00570 AC012339.2-201ENST00000523996 453 ntBASIC5.51□□□□□ -1.53
SOX1O00570 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.51□□□□□ -1.53
SOX1O00570 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 AC012409.4-201ENST00000612923 249 ntBASIC5.51□□□□□ -1.53
SOX1O00570 MIR6853-201ENST00000619642 74 ntBASIC5.51□□□□□ -1.53
SOX1O00570 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 AC026523.2-201ENST00000625039 7739 ntBASIC5.51□□□□□ -1.53
SOX1O00570 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SOX1O00570 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 AC092079.1-201ENST00000558620 1985 ntBASIC5.51□□□□□ -1.53
SOX1O00570 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SOX1O00570 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SOX1O00570 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SOX1O00570 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 AP000547.3-204ENST00000588548 2523 ntBASIC5.5□□□□□ -1.53
SOX1O00570 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 AL442639.1-201ENST00000625030 1899 ntBASIC5.5□□□□□ -1.53
SOX1O00570 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
SOX1O00570 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 Y_RNA.5-201ENST00000362334 102 ntBASIC5.5□□□□□ -1.53
SOX1O00570 Y_RNA.135-201ENST00000363439 95 ntBASIC5.5□□□□□ -1.53
SOX1O00570 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
SOX1O00570 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 RNU6-847P-201ENST00000411115 108 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms