Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.66□□□□□ -1.98
UPK1AO00322 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 snoU13.3-201ENST00000459441 104 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AL024509.2-201ENST00000493462 493 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.66□□□□□ -1.98
UPK1AO00322 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.66□□□□□ -1.98
UPK1AO00322 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.66□□□□□ -1.98
UPK1AO00322 AC104229.1-201ENST00000561364 255 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC106734.1-201ENST00000568646 663 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC025588.3-201ENST00000604182 274 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC016542.1-201ENST00000608259 493 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC245100.7-201ENST00000609678 442 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 CR381653.2-201ENST00000624041 768 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.98
UPK1AO00322 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
UPK1AO00322 MTND4P21-201ENST00000453886 1357 ntBASIC2.65□□□□□ -1.98
UPK1AO00322 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 OR5H2-201ENST00000355273 945 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 RNU1-140P-201ENST00000365040 165 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 RNU6-441P-201ENST00000384545 106 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 MTND4P13-201ENST00000402078 1023 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 RPS20P25-201ENST00000412447 352 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.65□□□□□ -1.99
UPK1AO00322 HMGB1P15-201ENST00000453854 435 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 NECAP1P2-201ENST00000455668 727 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.65□□□□□ -1.99
UPK1AO00322 snoU13.24-201ENST00000458998 104 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 S100A11P2-201ENST00000467589 312 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 AC010285.1-201ENST00000470580 392 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.65□□□□□ -1.99
UPK1AO00322 SETP12-201ENST00000514068 805 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 RNU6-362P-201ENST00000516736 90 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.65□□□□□ -1.99
UPK1AO00322 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.65□□□□□ -1.99
UPK1AO00322 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.65□□□□□ -1.99
UPK1AO00322 OR8K4P-201ENST00000534608 872 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.65□□□□□ -1.99
UPK1AO00322 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.65□□□□□ -1.99
UPK1AO00322 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.65□□□□□ -1.99
UPK1AO00322 AC004217.3-201ENST00000551552 878 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.65□□□□□ -1.99
UPK1AO00322 AL669831.4-202ENST00000590817 238 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 DPRXP5-201ENST00000604662 539 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 AC079791.1-201ENST00000605356 973 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 AC116096.1-201ENST00000566804 2314 ntBASIC2.65□□□□□ -1.99
UPK1AO00322 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
UPK1AO00322 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UPK1AO00322 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.65□□□□□ -1.99
UPK1AO00322 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
UPK1AO00322 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
UPK1AO00322 SNORD56.4-201ENST00000363883 71 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SNORA25.6-201ENST00000364121 118 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.64□□□□□ -1.99
UPK1AO00322 DEFB109C-201ENST00000382575 264 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 DEFB109B-201ENST00000382656 264 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 EEF1A1P41-201ENST00000414667 207 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
UPK1AO00322 RPL21P40-201ENST00000428586 483 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.64□□□□□ -1.99
UPK1AO00322 RPS20P5-201ENST00000434808 360 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 RPS7P2-201ENST00000435134 607 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC112653.1-201ENST00000443851 386 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AL929288.2-201ENST00000446368 407 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC005002.1-201ENST00000447458 540 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC140076.1-201ENST00000449897 361 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 NPM1P13-201ENST00000452663 865 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 RPS24P6-201ENST00000452670 400 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.64□□□□□ -1.99
UPK1AO00322 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.64□□□□□ -1.99
UPK1AO00322 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC004062.1-201ENST00000509926 645 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SNORA31.20-201ENST00000517111 133 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SNORA70.24-201ENST00000517233 118 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.64□□□□□ -1.99
UPK1AO00322 IGJP1-201ENST00000522682 475 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms