Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL592148.1-201ENST00000413568 445 ntBASIC2.88□□□□□ -1.95
DFFAO00273 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.88□□□□□ -1.95
DFFAO00273 VN1R42P-201ENST00000424651 344 ntBASIC2.88□□□□□ -1.95
DFFAO00273 AC093151.1-201ENST00000427711 313 ntBASIC2.88□□□□□ -1.95
DFFAO00273 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
DFFAO00273 RNFT1P2-201ENST00000443064 757 ntBASIC2.88□□□□□ -1.95
DFFAO00273 HMGB1P15-201ENST00000453854 435 ntBASIC2.88□□□□□ -1.95
DFFAO00273 AP001025.2-201ENST00000490908 477 ntBASIC2.88□□□□□ -1.95
DFFAO00273 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.88□□□□□ -1.95
DFFAO00273 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.88□□□□□ -1.95
DFFAO00273 IGJP1-201ENST00000522682 475 ntBASIC2.88□□□□□ -1.95
DFFAO00273 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.88□□□□□ -1.95
DFFAO00273 AC104229.1-201ENST00000561364 255 ntBASIC2.88□□□□□ -1.95
DFFAO00273 CYCSP39-201ENST00000565821 309 ntBASIC2.88□□□□□ -1.95
DFFAO00273 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.88□□□□□ -1.95
DFFAO00273 ZNF861P-201ENST00000588126 639 ntBASIC2.88□□□□□ -1.95
DFFAO00273 KATNBL1P5-201ENST00000605015 517 ntBASIC2.88□□□□□ -1.95
DFFAO00273 RMST_10.1-201ENST00000616309 154 ntBASIC2.88□□□□□ -1.95
DFFAO00273 Z99129.2-201ENST00000619967 314 ntBASIC2.88□□□□□ -1.95
DFFAO00273 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.88□□□□□ -1.95
DFFAO00273 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.88□□□□□ -1.95
DFFAO00273 MFSD8-213ENST00000641134 1327 ntBASIC2.88□□□□□ -1.95
DFFAO00273 MTND5P31-201ENST00000419366 1374 ntBASIC2.87□□□□□ -1.95
DFFAO00273 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.87□□□□□ -1.95
DFFAO00273 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.87□□□□□ -1.95
DFFAO00273 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
DFFAO00273 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
DFFAO00273 MIR525-201ENST00000384978 85 ntBASIC2.87□□□□□ -1.95
DFFAO00273 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
DFFAO00273 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.87□□□□□ -1.95
DFFAO00273 RPP40P1-201ENST00000426762 456 ntBASIC2.87□□□□□ -1.95
DFFAO00273 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.87□□□□□ -1.95
DFFAO00273 AC092170.1-201ENST00000440211 356 ntBASIC2.87□□□□□ -1.95
DFFAO00273 AL135938.1-201ENST00000443141 297 ntBASIC2.87□□□□□ -1.95
DFFAO00273 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.87□□□□□ -1.95
DFFAO00273 AC112653.1-201ENST00000443851 386 ntBASIC2.87□□□□□ -1.95
DFFAO00273 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.87□□□□□ -1.95
DFFAO00273 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
DFFAO00273 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.87□□□□□ -1.95
DFFAO00273 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
DFFAO00273 RNA5SP468-201ENST00000516782 93 ntBASIC2.87□□□□□ -1.95
DFFAO00273 OR8K4P-201ENST00000534608 872 ntBASIC2.87□□□□□ -1.95
DFFAO00273 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.87□□□□□ -1.95
DFFAO00273 OR4H6P-202ENST00000603819 340 ntBASIC2.87□□□□□ -1.95
DFFAO00273 AC025588.3-201ENST00000604182 274 ntBASIC2.87□□□□□ -1.95
DFFAO00273 AC112503.2-201ENST00000609005 552 ntBASIC2.87□□□□□ -1.95
DFFAO00273 AC006213.5-201ENST00000619673 288 ntBASIC2.87□□□□□ -1.95
DFFAO00273 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.87□□□□□ -1.95
DFFAO00273 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
DFFAO00273 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.86□□□□□ -1.95
DFFAO00273 AC103988.1-201ENST00000566382 2177 ntBASIC2.86□□□□□ -1.95
DFFAO00273 RNU6-50P-201ENST00000362356 103 ntBASIC2.86□□□□□ -1.95
DFFAO00273 SNORD56.4-201ENST00000363883 71 ntBASIC2.86□□□□□ -1.95
DFFAO00273 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.86□□□□□ -1.95
DFFAO00273 RNU1-101P-201ENST00000391171 127 ntBASIC2.86□□□□□ -1.95
DFFAO00273 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
DFFAO00273 Z92545.1-201ENST00000411782 234 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AC096664.2-201ENST00000411843 406 ntBASIC2.86□□□□□ -1.95
DFFAO00273 RAD23BP2-201ENST00000416003 1207 ntBASIC2.86□□□□□ -1.95
DFFAO00273 HSFY1P1-201ENST00000423928 1178 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AC006548.1-201ENST00000427470 102 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.86□□□□□ -1.95
DFFAO00273 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.86□□□□□ -1.95
DFFAO00273 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AL929288.2-201ENST00000446368 407 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.86□□□□□ -1.95
DFFAO00273 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.86□□□□□ -1.95
DFFAO00273 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.86□□□□□ -1.95
DFFAO00273 AL136126.1-201ENST00000473603 402 ntBASIC2.86□□□□□ -1.95
DFFAO00273 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.86□□□□□ -1.95
DFFAO00273 HIGD1AP13-201ENST00000509878 289 ntBASIC2.86□□□□□ -1.95
DFFAO00273 SNORA31.26-201ENST00000517250 137 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.86□□□□□ -1.95
DFFAO00273 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.86□□□□□ -1.95
DFFAO00273 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.86□□□□□ -1.95
DFFAO00273 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.86□□□□□ -1.95
DFFAO00273 AC135507.2-201ENST00000612443 309 ntBASIC2.86□□□□□ -1.95
DFFAO00273 CR381572.1-201ENST00000625098 102 ntBASIC2.86□□□□□ -1.95
DFFAO00273 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DFFAO00273 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.86□□□□□ -1.95
DFFAO00273 AP003122.5-201ENST00000527668 3766 ntBASIC2.86□□□□□ -1.95
DFFAO00273 AL365361.1-201ENST00000566942 3481 ntBASIC2.85□□□□□ -1.95
DFFAO00273 RNU6-989P-201ENST00000362756 107 ntBASIC2.85□□□□□ -1.95
DFFAO00273 RNU6-921P-201ENST00000384361 107 ntBASIC2.85□□□□□ -1.95
DFFAO00273 NPM1P10-201ENST00000398310 865 ntBASIC2.85□□□□□ -1.95
DFFAO00273 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DFFAO00273 MIR887-201ENST00000401258 79 ntBASIC2.85□□□□□ -1.95
DFFAO00273 AL031121.1-201ENST00000406553 254 ntBASIC2.85□□□□□ -1.95
DFFAO00273 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.85□□□□□ -1.95
DFFAO00273 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.85□□□□□ -1.95
DFFAO00273 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
DFFAO00273 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.85□□□□□ -1.95
DFFAO00273 AL009174.1-201ENST00000426577 416 ntBASIC2.85□□□□□ -1.95
DFFAO00273 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
DFFAO00273 RSL24D1P8-201ENST00000434442 492 ntBASIC2.85□□□□□ -1.95
DFFAO00273 SETP8-201ENST00000435341 628 ntBASIC2.85□□□□□ -1.95
DFFAO00273 AL513043.1-201ENST00000439124 535 ntBASIC2.85□□□□□ -1.95
DFFAO00273 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
DFFAO00273 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.85□□□□□ -1.95
DFFAO00273 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms