Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL024509.2-201ENST00000493462 493 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 FAM92A1P1-201ENST00000528023 890 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 NDUFS5P6-201ENST00000529136 295 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AMZ2P1-203ENST00000565833 850 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC245389.1-201ENST00000605141 529 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 NF1P10-201ENST00000613227 742 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AC245884.12-201ENST00000615364 59 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 ATP5A1P2-202ENST00000616464 443 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 MIR8057-201ENST00000620957 69 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL031601.2-202ENST00000622650 282 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 ZNF833P-201ENST00000424938 1494 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 RNU6-356P-201ENST00000384140 107 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 RNVU1-14-201ENST00000384770 164 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 RNU4-72P-201ENST00000410754 173 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AL030996.1-201ENST00000411430 235 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 RPL17P12-201ENST00000413391 526 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC092427.1-202ENST00000430569 476 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 MTCO3P21-201ENST00000430791 643 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC044797.1-201ENST00000445744 679 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC008427.1-201ENST00000503102 655 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 RN7SKP82-201ENST00000516786 223 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 COX6CP8-201ENST00000522620 226 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 OR5AQ1P-201ENST00000527596 927 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 OSBPL9P3-201ENST00000534523 595 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AL121839.1-201ENST00000556233 1185 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AL138976.2-201ENST00000563989 694 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC005412.1-201ENST00000580812 1049 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC022069.1-201ENST00000582910 658 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 MIR5002-201ENST00000584713 97 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC010620.2-201ENST00000600135 313 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC125494.3-201ENST00000602759 455 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC099654.7-201ENST00000635788 2127 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 AC097714.1-201ENST00000511272 1647 ntBASIC1.5□□□□□ -2.17
LINC01549A6NIU2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01549A6NIU2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 RNA5SP68-201ENST00000363885 119 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 SNORA44-201ENST00000384584 132 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC025750.1-201ENST00000399891 379 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 MTATP6P4-201ENST00000427725 675 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 CBWD4P-201ENST00000445695 655 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 IFNA11P-201ENST00000446352 526 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC069277.2-201ENST00000454211 432 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC025768.1-201ENST00000510057 267 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 MTCO2P32-201ENST00000514865 403 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC120053.1-201ENST00000607706 736 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC012314.7-201ENST00000619693 93 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01549A6NIU2 ZNF33CP-201ENST00000432492 2030 ntBASIC1.49□□□□□ -2.17
LINC01549A6NIU2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01549A6NIU2 RNU1-52P-201ENST00000384190 164 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms