Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC006499.5-201ENST00000505037 514 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC118282.2-201ENST00000508739 374 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 IGKV2-23-201ENST00000518729 323 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC104417.1-201ENST00000523974 751 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC023538.1-201ENST00000534576 736 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AP000619.3-201ENST00000535634 1127 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MTND3P13-201ENST00000574391 343 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MIR2682-201ENST00000580305 110 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC107952.2-201ENST00000606048 486 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC009464.1-201ENST00000615731 469 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 VN1R7P-201ENST00000619242 903 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC120349.3-201ENST00000624377 529 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 CR381572.1-201ENST00000625098 102 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNU6-115P-201ENST00000364310 107 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MTND4P13-201ENST00000402078 1023 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL023807.1-201ENST00000407932 359 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNU6-575P-201ENST00000411326 105 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MTATP6P20-201ENST00000414147 562 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL591719.1-201ENST00000444669 744 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC104073.1-201ENST00000451988 151 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 TRBV26-201ENST00000456572 344 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 USP9YP25-201ENST00000457708 443 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC005410.1-202ENST00000460347 485 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RPL7P49-201ENST00000471402 708 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RN7SL293P-201ENST00000481765 281 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC114967.1-201ENST00000504890 259 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC011352.3-201ENST00000505162 593 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 SNORA31.20-201ENST00000517111 133 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MRPS36P3-201ENST00000519284 130 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL357094.1-201ENST00000603845 844 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AL583856.2-201ENST00000606298 543 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC073968.1-201ENST00000618594 637 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC012314.7-201ENST00000619693 93 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC013470.4-201ENST00000619978 986 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 AC011330.2-201ENST00000621680 635 ntBASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49BA6NDI0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 MIR148B-201ENST00000362252 99 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RNU1-33P-201ENST00000364249 162 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RNU6-224P-201ENST00000384055 107 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AF228730.1-201ENST00000397972 663 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RNA5SP129-201ENST00000410276 118 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 MTND4P3-201ENST00000417829 541 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RPS3AP37-201ENST00000419176 745 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 SETP5-201ENST00000437270 562 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 PDSS1P2-201ENST00000449397 678 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 ZNF886P-201ENST00000450781 723 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 RPL21P10-201ENST00000463521 490 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AC084024.2-201ENST00000503480 791 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 HMGB1P22-201ENST00000505315 124 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 AC048346.1-201ENST00000510247 144 ntBASIC3.53□□□□□ -1.84
TRIM49BA6NDI0 ARL2BPP5-201ENST00000523141 481 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms