Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HMGB1P41-201ENST00000520234 440 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AP003102.1-201ENST00000525638 661 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 OR7K1P-201ENST00000546439 926 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 MIR4298-201ENST00000584380 73 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL356575.1-201ENST00000603008 283 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RPL23AP88-201ENST00000605759 454 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AP004607.9-201ENST00000618202 316 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC109315.1-201ENST00000584143 1347 ntBASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AP000526.1-201ENST00000603308 1388 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL672167.1-206ENST00000356293 943 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RNU1-100P-201ENST00000365255 165 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 MRPL50P2-201ENST00000416821 482 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RFESDP1-201ENST00000422350 461 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC112220.1-201ENST00000434628 355 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RPL23AP31-201ENST00000456160 467 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 SRIP1-201ENST00000489235 288 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 MIR4635-201ENST00000583759 79 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC060766.3-201ENST00000591442 263 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC006023.2-201ENST00000609916 167 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC004944.1-201ENST00000517807 3059 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC092435.3-201ENST00000565538 3654 ntBASIC2.1□□□□□ -2.07
TCRBV4S1A1TA0A5B7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 DEFA7P-201ENST00000382676 285 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RNU6-629P-201ENST00000384061 103 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RNU6-301P-201ENST00000384277 107 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL445529.1-201ENST00000398713 389 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 MTATP6P31-201ENST00000406985 692 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RNU2-71P-201ENST00000411395 189 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RAP1BP1-201ENST00000412709 553 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 Z93242.1-201ENST00000427102 353 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RPL34P26-201ENST00000445636 354 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC126182.1-201ENST00000478134 357 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 HMGB1P22-201ENST00000505315 124 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 SNORA31.15-201ENST00000516771 132 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 RNU6-1073P-201ENST00000517182 106 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC022616.2-201ENST00000523185 300 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC007954.1-201ENST00000554198 494 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL049870.4-201ENST00000555741 486 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC009097.3-201ENST00000563557 1018 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 BNIP3P7-201ENST00000605641 516 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL390240.1-201ENST00000612950 384 ntBASIC2.09□□□□□ -2.07
TCRBV4S1A1TA0A5B7 AL049780.3-201ENST00000624612 1583 ntBASIC2.09□□□□□ -2.08
TCRBV4S1A1TA0A5B7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TCRBV4S1A1TA0A5B7 MAPK10-322ENST00000641485 4530 ntBASIC2.09□□□□□ -2.08
TCRBV4S1A1TA0A5B7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AP001350.1-201ENST00000601906 1524 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC002546.1-201ENST00000588041 2504 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 RNU4-82P-201ENST00000362443 140 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 BTBD10P2-201ENST00000404779 676 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC073310.1-201ENST00000423226 1033 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 RPL21P66-201ENST00000426566 466 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 SNORD59.2-201ENST00000516873 68 ntBASIC2.08□□□□□ -2.08
TCRBV4S1A1TA0A5B7 RNU6-711P-201ENST00000517255 106 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms