Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 HMGB1P15-201ENST00000453854 435 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 RPS4XP10-201ENST00000465034 731 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 HMGB1P25-201ENST00000468402 607 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 MTCO2P32-201ENST00000514865 403 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 NDUFS5P6-201ENST00000529136 295 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 MTND5P21-201ENST00000531961 522 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC090502.2-201ENST00000549267 280 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC006116.7-201ENST00000590141 756 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AL031985.2-201ENST00000600955 480 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC091946.2-201ENST00000606105 291 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC092954.1-201ENST00000609121 445 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC092650.2-201ENST00000619984 902 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AP000720.1-201ENST00000625091 483 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 MFSD8-245ENST00000641743 948 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.02□□□□□ -1.93
TCRBV9S1A1TA0A576 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AL672296.1-201ENST00000427780 2158 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 GDI2P1-201ENST00000429312 1336 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 Y_RNA.126-201ENST00000363382 111 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU6-707P-201ENST00000364647 95 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU6-328P-201ENST00000390887 106 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 MTCO1P56-201ENST00000401674 224 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AL079342.2-201ENST00000403367 482 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU6-712P-201ENST00000410558 100 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC096533.1-201ENST00000411645 353 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 LUZP4P1-201ENST00000415420 344 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AL445669.2-201ENST00000454425 421 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 CFTRP1-201ENST00000456646 183 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC013828.1-201ENST00000481845 158 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC069306.1-201ENST00000507006 843 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU6-1028P-201ENST00000517164 93 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 IGKV2-23-201ENST00000518729 323 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC027309.2-201ENST00000520566 192 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC034105.3-201ENST00000565294 442 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC090079.2-201ENST00000575289 768 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AC018755.4-201ENST00000619715 454 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 AL138955.1-201ENST00000622881 1040 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 U6.105-201ENST00000637379 88 ntBASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
TCRBV9S1A1TA0A576 MTND4P34-201ENST00000572715 1371 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 CRP-202ENST00000368110 667 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU6-657P-201ENST00000383904 107 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC016769.3-201ENST00000396562 315 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 ARF4P3-201ENST00000397387 509 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 RNU2-28P-201ENST00000410457 189 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 C1DP1-201ENST00000426049 402 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 RPS29P2-201ENST00000479278 136 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC004062.1-201ENST00000509926 645 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 RN7SKP157-201ENST00000516174 282 ntBASIC3□□□□□ -1.93
TCRBV9S1A1TA0A576 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms