Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6-297P-201ENST00000384636 107 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 Y_RNA.608-201ENST00000410647 95 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RPL7AP73-201ENST00000413490 353 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 OR8F1P-201ENST00000425243 930 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RPL18P10-201ENST00000425606 538 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 BX890604.2-201ENST00000427883 474 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 USP9YP28-201ENST00000435142 589 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 SKP1P1-201ENST00000438081 489 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 PGBD4P3-201ENST00000440731 581 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 PDSS1P2-201ENST00000449397 678 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AL590365.1-201ENST00000450788 243 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 MTCO1P42-201ENST00000457379 726 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 OR9M1P-201ENST00000459641 921 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RPL21P103-201ENST00000479921 488 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC011825.1-201ENST00000484967 388 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC093267.1-201ENST00000489176 961 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AP001025.2-201ENST00000490908 477 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC112204.1-201ENST00000502591 103 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC096751.1-202ENST00000502691 1067 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 MTND2P33-201ENST00000506452 1031 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RNA5SP179-201ENST00000517284 121 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AP002453.2-201ENST00000533503 320 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC090877.1-201ENST00000561418 344 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC090615.1-201ENST00000577519 154 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 TPMTP1-201ENST00000592307 737 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 SEPT7P9-203ENST00000604116 343 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC091965.4-201ENST00000607691 587 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC109347.2-201ENST00000610220 349 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AL589743.7-201ENST00000612637 233 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC005332.10-201ENST00000612725 619 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AC026585.1-201ENST00000619582 524 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 RMST_9.1-201ENST00000619945 193 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.99□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-809P-201ENST00000384461 107 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 SNORA40.3-201ENST00000390964 122 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 HMGN2P8-201ENST00000391458 268 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 MIR1250-201ENST00000408098 113 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RNU2-66P-201ENST00000410650 161 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RNU2-15P-201ENST00000410692 191 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC016397.1-201ENST00000412463 242 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC005517.2-201ENST00000424673 553 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RPS3AP44-201ENST00000425466 790 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC010975.2-201ENST00000427781 588 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 MTCYBP45-201ENST00000435243 565 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 Z74696.2-201ENST00000436514 498 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC091862.1-201ENST00000438016 1100 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL022238.1-201ENST00000442557 355 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 FAM103A2P-201ENST00000444122 354 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RPL29P29-201ENST00000448725 423 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 MTND1P27-201ENST00000451117 902 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 RPS20P24-201ENST00000457473 361 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC146507.1-201ENST00000468335 354 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms