Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AC104629.2-201ENST00000468627 598 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AP000867.2-201ENST00000532468 320 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 YWHAZP1-201ENST00000556286 722 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AC069304.3-201ENST00000603938 1084 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AC117490.2-201ENST00000610042 594 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 RNU4-31P-201ENST00000384211 141 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 RPL31P2-201ENST00000413849 377 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 MTND2P16-201ENST00000419987 799 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 HMGB1P26-201ENST00000452520 628 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AC011468.4-201ENST00000603942 409 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 MTND4P34-201ENST00000572715 1371 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AL590004.2-201ENST00000404787 371 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AL031663.1-201ENST00000437445 219 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC011816.1-201ENST00000441346 546 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 HIGD1AP2-201ENST00000446367 280 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AL049830.2-201ENST00000480072 201 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC117525.1-201ENST00000515228 503 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 OR4A45P-201ENST00000529954 901 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AL389895.1-201ENST00000554127 252 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AC241585.2-209ENST00000638217 143 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 AP006437.1-201ENST00000641440 3685 ntBASIC2.68□□□□□ -1.98
SCN10AQ9Y5Y9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 CYCSP45-201ENST00000402289 315 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 MIR3690-201ENST00000580266 75 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC092881.1-201ENST00000638218 2733 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC110774.1-201ENST00000623567 2018 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 MIR764-201ENST00000390811 85 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 RNU2-6P-201ENST00000411404 190 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 RPS15AP6-201ENST00000420703 385 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC021146.7-201ENST00000509604 775 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 AC006023.2-201ENST00000609916 167 ntBASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCN10AQ9Y5Y9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 ATP5F1P6-201ENST00000402768 767 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 RN7SKP140-201ENST00000411196 284 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AL513477.1-202ENST00000417061 214 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 SRIP2-201ENST00000428470 166 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 ARF4P2-201ENST00000430209 526 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AC023512.1-201ENST00000444513 499 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 OR4G11P-201ENST00000492842 939 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 TMEM248P1-201ENST00000510579 951 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 RN7SKP277-201ENST00000516895 283 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AC061975.8-201ENST00000587058 721 ntBASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN10AQ9Y5Y9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SCN10AQ9Y5Y9 RNU1-73P-201ENST00000383971 164 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms