Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 HMGB1P25-201ENST00000468402 607 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RPS29P2-201ENST00000479278 136 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC108941.1-201ENST00000502853 530 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC025554.1-201ENST00000505641 188 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 MLLT10P2-201ENST00000506434 249 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC110760.3-202ENST00000515177 371 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC125611.1-201ENST00000549563 229 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AADACP1-206ENST00000561502 1193 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR5047-201ENST00000579212 100 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AP001269.3-201ENST00000588718 329 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 XIAPP1-201ENST00000603162 600 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC090897.3-201ENST00000636973 1157 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 MAPK10-373ENST00000641983 6772 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 SNORD116.1-201ENST00000365628 92 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 Y_RNA.408-201ENST00000383987 102 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU1-89P-201ENST00000384592 164 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-1242P-201ENST00000391052 103 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC073063.1-201ENST00000434352 607 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RPL23AP76-201ENST00000441860 458 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 USP9YP34-201ENST00000453983 808 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AL445669.2-201ENST00000454425 421 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RPS27AP1-201ENST00000475545 471 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC017015.1-201ENST00000477387 286 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC026412.2-201ENST00000512270 1075 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RN7SKP13-201ENST00000515933 244 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RN7SKP57-201ENST00000517248 293 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AL132657.2-201ENST00000564417 358 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC087481.2-201ENST00000565492 330 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR4760-201ENST00000585040 80 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AC091925.2-201ENST00000625059 256 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 AL136164.4-201ENST00000625013 2135 ntBASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA1Q9Y5H4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-636P-201ENST00000384598 107 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC096664.2-201ENST00000411843 406 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL592310.1-201ENST00000414330 671 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL049610.1-201ENST00000423374 372 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC084290.1-201ENST00000434995 374 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MTND4P6-201ENST00000438297 472 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC092427.1-201ENST00000439177 601 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MTCO2P25-201ENST00000447065 681 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC093278.1-201ENST00000494700 600 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC105914.1-201ENST00000511798 226 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-27P-201ENST00000516146 107 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 IGKV2-38-201ENST00000517443 247 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 HSPA8P13-201ENST00000523715 472 ntBASIC3.61□□□□□ -1.83
PCDHGA1Q9Y5H4 AC103843.2-201ENST00000530523 682 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms