Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB1Q9Y5F3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RNA5SP388-201ENST00000362584 119 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 SNORA57.1-201ENST00000391227 145 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RPL23AP32-201ENST00000395315 459 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 BTF3P7-201ENST00000407097 488 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RAP1BP3-201ENST00000407180 549 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RN7SKP263-201ENST00000411194 309 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 USP9YP36-201ENST00000424581 829 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RPL21P91-201ENST00000429231 479 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 MTND4LP10-201ENST00000435146 291 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 MTND4P25-201ENST00000441039 533 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AL049734.2-201ENST00000441066 616 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 SNORD121B-201ENST00000458838 81 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC146507.1-201ENST00000468335 354 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC114967.1-201ENST00000504890 259 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC007016.1-201ENST00000512110 244 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6-27P-201ENST00000516146 107 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AP000907.2-201ENST00000530827 353 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC123904.2-201ENST00000548059 300 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC068135.2-201ENST00000569293 1028 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 MIR4458-201ENST00000578872 75 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 MIR6863-201ENST00000636112 90 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AC083843.3-201ENST00000623679 2186 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 RAD17P1-201ENST00000418130 2042 ntBASIC4.55□□□□□ -1.68
PCDHB1Q9Y5F3 EOGT-210ENST00000615922 1931 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6-821P-201ENST00000390995 107 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 MTCO3P40-201ENST00000392516 676 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC127391.1-201ENST00000411737 98 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC005517.2-201ENST00000424673 553 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL358934.1-201ENST00000432346 324 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 FCF1P1-201ENST00000432690 571 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 MTATP6P30-201ENST00000443540 664 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL162591.2-201ENST00000449634 317 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL359385.1-201ENST00000456509 365 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AF186190.1-201ENST00000517470 480 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AP003497.1-201ENST00000528472 562 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 PDCD5P1-201ENST00000543528 309 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 RPL21P7-201ENST00000557463 483 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL356432.3-201ENST00000568952 465 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC060771.1-201ENST00000582031 164 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 RPL7P50-201ENST00000600588 727 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AL133173.2-201ENST00000614270 90 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC040168.1-201ENST00000623594 991 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC024560.2-201ENST00000507981 1497 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 AC027287.1-201ENST00000553115 1453 ntBASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB1Q9Y5F3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms