Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC231759.1-201ENST00000616455 597 ntBASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 AC015967.1-201ENST00000619893 476 ntBASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 AC243312.2-201ENST00000623340 601 ntBASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CHMP2BQ9UQN3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 MTCO1P56-201ENST00000401674 224 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RAB9AP3-201ENST00000412737 573 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RAB9AP1-201ENST00000449393 573 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC092757.1-201ENST00000467293 467 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RPL7P38-201ENST00000488396 739 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 OR4G11P-201ENST00000492842 939 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC006390.1-201ENST00000508068 283 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 DEFB130C-202ENST00000530001 230 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC018630.1-201ENST00000541376 925 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC138915.2-201ENST00000569776 97 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 BDH2P1-201ENST00000602288 736 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL162713.1-201ENST00000604480 262 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AL353748.2-201ENST00000622148 471 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AC109454.4-201ENST00000623411 649 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 AP003476.1-201ENST00000623984 516 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
CHMP2BQ9UQN3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AL591034.1-201ENST00000407447 340 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 RN7SKP123-201ENST00000410732 291 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC007899.1-201ENST00000412776 775 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 DPRXP1-201ENST00000426312 460 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 MTCO1P3-201ENST00000429327 192 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 HSPD1P21-201ENST00000436541 245 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 SNORA31.8-201ENST00000516327 108 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 SNRPGP16-201ENST00000533275 226 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC090079.2-201ENST00000575289 768 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AL109653.1-201ENST00000603091 248 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 BX323046.1-201ENST00000610145 535 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AL390240.1-201ENST00000612950 384 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AL034408.1-202ENST00000636088 415 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 AC002546.1-201ENST00000588041 2504 ntBASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CHMP2BQ9UQN3 Z99496.1-201ENST00000469424 1477 ntBASIC3.29□□□□□ -1.88
CHMP2BQ9UQN3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHMP2BQ9UQN3 SNORD51-201ENST00000384320 80 ntBASIC3.29□□□□□ -1.88
CHMP2BQ9UQN3 SNORA57.1-201ENST00000391227 145 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms