Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 RNU6-525P-201ENST00000363685 104 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 RPL23AP29-201ENST00000397284 453 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AL023807.1-201ENST00000407932 359 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AL450338.1-201ENST00000407987 512 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 BTF3L4P1-201ENST00000413813 468 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 THAP5P1-201ENST00000439089 262 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC092427.1-201ENST00000439177 601 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 MTND1P30-201ENST00000441241 901 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 TRBV26-201ENST00000456572 344 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 MTCO3P2-201ENST00000457365 171 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC006517.1-201ENST00000480485 328 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC106038.2-201ENST00000520706 568 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 RNU6-88P-201ENST00000606801 100 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 HULC.1-201ENST00000612720 240 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC231657.1-201ENST00000624313 397 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC079228.1-201ENST00000624774 1049 ntBASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK11AQ9UQ88 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC007685.1-201ENST00000329806 452 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 RNA5SP189-201ENST00000364920 115 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 Y_RNA.436-201ENST00000384097 102 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 MIR93-201ENST00000385024 80 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 MIR483-201ENST00000385070 76 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AL133384.1-201ENST00000412744 351 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC244098.2-201ENST00000422068 99 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 HSPD1P21-201ENST00000436541 245 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC104073.1-201ENST00000451988 151 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC080014.1-201ENST00000496877 1201 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 RNA5SP216-201ENST00000516111 123 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 IGKV2D-36-201ENST00000518643 226 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AP000790.1-201ENST00000528891 737 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 ZNF705CP-201ENST00000530515 889 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC069240.1-201ENST00000548774 375 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 SNORD39.3-201ENST00000584451 71 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 WISP1-OT1-201ENST00000602893 642 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AC008638.3-201ENST00000603341 463 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 U6.105-201ENST00000637379 88 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 ZNF833P-201ENST00000424938 1494 ntBASIC6.02□□□□□ -1.45
CDK11AQ9UQ88 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 SNRPEP3-201ENST00000338402 276 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 RNU6-623P-201ENST00000363143 105 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 SNORD3H-201ENST00000384486 214 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 MT-TH-201ENST00000387441 69 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 MTND1P20-201ENST00000430341 950 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 Z74696.2-201ENST00000436514 498 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL138799.3-201ENST00000438968 350 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 RPL23AP16-201ENST00000441715 421 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 TPTE2P5-203ENST00000458118 728 ntBASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK11AQ9UQ88 LTV1P1-201ENST00000510683 1237 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms