Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 VDAC1P9-201ENST00000412766 841 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 Z98949.2-201ENST00000440996 144 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 TXNP1-201ENST00000441872 371 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RPL30P15-201ENST00000457129 321 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RNU6-1218P-201ENST00000458990 108 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 MIR2053-201ENST00000459295 91 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RPL35AP28-201ENST00000459730 331 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 PLGLA-201ENST00000465668 449 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 HMGB1P30-201ENST00000492455 606 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RNU6-976P-201ENST00000516086 111 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC100784.1-201ENST00000522790 310 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AP000859.1-201ENST00000525536 307 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC040958.1-201ENST00000561102 201 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC008269.2-201ENST00000561915 1105 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AF038458.1-201ENST00000588406 262 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC008782.1-201ENST00000603386 430 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC006363.1-201ENST00000603806 463 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 NUTF2P8-201ENST00000604593 363 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AL390240.1-201ENST00000612950 384 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC083806.3-201ENST00000614016 455 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC074140.1-201ENST00000621617 208 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AL355480.1-201ENST00000629041 99 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 OR52H1-202ENST00000641796 1061 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC090337.1-201ENST00000579651 2074 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC235565.1-201ENST00000456962 1325 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AL138713.1-201ENST00000624026 2130 ntBASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.39□□□□□ -1.55
AP4E1Q9UPM8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RNU6-1252P-201ENST00000363054 104 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.149-201ENST00000363558 117 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 U3.7-201ENST00000363668 216 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 SNORD113-7-201ENST00000363762 77 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.212-201ENST00000364177 102 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RNU6-702P-201ENST00000364982 107 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RNU6-641P-201ENST00000384006 107 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RNU6-1032P-201ENST00000384100 107 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 GSTM3P2-201ENST00000412746 530 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 COX5BP7-201ENST00000414780 274 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 MCFD2P1-201ENST00000417812 300 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC018865.2-201ENST00000423631 129 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 PSMA6P3-201ENST00000428242 164 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RPL21P23-201ENST00000446654 460 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC108059.3-201ENST00000456388 214 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 SNRPFP3-201ENST00000457792 225 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 COPS8P2-201ENST00000473228 627 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 RPS21P4-201ENST00000487122 248 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC093767.1-201ENST00000504523 156 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 HMGB1P19-201ENST00000517578 577 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC018442.3-201ENST00000523025 183 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC024940.3-201ENST00000538551 316 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AL359219.2-201ENST00000555184 348 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC007225.2-201ENST00000562529 256 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 MIR5690-201ENST00000583739 73 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AL512329.2-201ENST00000607350 548 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AC022467.1-201ENST00000614738 749 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 AL442639.1-201ENST00000625030 1899 ntBASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
AP4E1Q9UPM8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms